Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00251 ATGCTGATCTTGCCACCAATGAAAAGCTTCAAAAGCAGCCATAGCAGTAACGATCAGACGACGGAATCAAAAGAGGAATGTGTCATTTGCTTAGAAGAATTCAAGAATGGGGAGTTGATTCAACCTTTGCCAAAGTGTAACCATGAGTTCCATGCGCCCTGCATCAATTCTTGGTTTCACAGTGGAAAATTTACTTGTCCTATTTGTCGATTTTGATCAAAGATACATTTGAAGGAGAAGTTTTGGGAGGGGTTGGTTCGAGGTATTCCACAAGAAGATATGATTCTCATCGGAAGAGACTTAAATGGTCTTGTTGGTTG 320 0.4062 MLILPPMKSFKSSHSSNDQTTESKEECVICLEEFKNGELIQPLPKCNHEFHAPCINSWFHSGKFTCPICRFSKIHLKEKFWEGLVRGIPQEDMILIGRDLNGLVG 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00251 105 ProSiteProfiles Zinc finger RING-type profile. 27 70 IPR001841 -
Bva07g00251 105 PANTHER OS06G0666500 PROTEIN 6 71 - -
Bva07g00251 105 SUPERFAMILY RING/U-box 20 74 - -
Bva07g00251 105 SMART ring_2 27 69 IPR001841 -
Bva07g00251 105 MobiDBLite consensus disorder prediction 1 23 - -
Bva07g00251 105 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 6 71 - -
Bva07g00251 105 Pfam Ring finger domain 26 70 IPR001841 -
Bva07g00251 105 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 74 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00251 Bva-Chr7 3712885 3714902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00251 3 83 Rapid Response to Elicitors AT3G05200 35.802 1.19e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00251 - K10664 aprc:113865236 98.2117