Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00238 ATGGAATGTCttcatgaaaatagaaatctGGTTTATGCAGGAAAAATCAACACATCAAAAGTCATAGCCATAGTCGTGCCAGTTGGTGTCTTCGCCATACTGCTCATGATTGTTTGCATATACTTCACACTAAGGAAGCCAACAAAACGTGATGGATATTATGAAAGTGATACTGATATTGTAAATGCCGAGTCATTGGAATATGATTTAGAAACCATCAAAGCGGCTACAAATAACTTTTCTGACGAAAATAAACTTGGACATGGTGGATTTGGGTCTGTTTACAAGGGTAAGCTCGACAATCAACACCAAATTGCTGTGAAAAGGTTATCAAAAGATTCTAGCCAAggagatttagaatttaagaatgAAGTACTGCTAGTTGCCAAGCTTCAACATCGAAATTTAGTTAGGCTACTTGGTTTCTGTTTGGAAAAACGAGAGAGGCTACTTATCTATGAGTTTCTTCCCAATAAAAGCCTTGATTACTTCTTATTTGATCCATTTGTACAAAAATCATTGGATTGGGAAAGACGTTACAGAATCATAGCAGGAATTGCCAAGGGTCTTTTGTATCTTCATGAGGATTCTCGATTGCGTATTGTTCATCGTGATCTTAAAGCAagcaatattttattagatgaaGAGATGAATCCGAAGATATCAGATTTTGGTATGGCAAGACTATTAGAGCAAACTCATGACAATACAAAAAGAATTGTGGGGACCTAtgGATATATGGCACCTGAGTATGAAAGATATGGGCATTTCTCAGTGAAGTCAGATGTCTTTAGTTTTGGTGTTTTAGTTTTAGAGATTTTAACTGGGGTGAAAAACAACAGCATCCGCCAACAGGAAAAATTCGGCCATCTACTCACCTTTGTATGGAAAAACTGGAAAGAAGGGACAGCTTTAAATGTTGTAGATCCCACAATATGCGAGGGTccaagaaatgaaattatgaaatgcATTCACGTTGGATTACTTTGTGTTCAAGAAAATGCAGATGAGAGACCAACAATGGCTGCCGTTGTAATCATGCTTAGCAGCAACTCCACAACACTGCCAAGTCCTTCACATCCTGCATTTTATATGATTGATACAAGTTGTTCAGCTGGTACCCACTCTGTTGAAGCATCTATCAATGAGGCTTCAATTACTGAGATTGATCCCCGCTA 1178 0.3591 MECLHENRNLVYAGKINTSKVIAIVVPVGVFAILLMIVCIYFTLRKPTKRDGYYESDTDIVNAESLEYDLETIKAATNNFSDENKLGHGGFGSVYKGKLDNQHQIAVKRLSKDSSQGDLEFKNEVLLVAKLQHRNLVRLLGFCLEKRERLLIYEFLPNKSLDYFLFDPFVQKSLDWERRYRIIAGIAKGLLYLHEDSRLRIVHRDLKASNILLDEEMNPKISDFGMARLLEQTHDNTKRIVGTYGYMAPEYERYGHFSVKSDVFSFGVLVLEILTGVKNNSIRQQEKFGHLLTFVWKNWKEGTALNVVDPTICEGPRNEIMKCIHVGLLCVQENADERPTMAAVVIMLSSNSTTLPSPSHPAFYMIDTSCSAGTHSVEASINEASITEIDPR 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00238 392 Gene3D Phosphorylase Kinase; domain 1 44 155 - -
Bva07g00238 392 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 11 375 - -
Bva07g00238 392 Pfam Protein tyrosine and serine/threonine kinase 83 346 IPR001245 GO:0004672|GO:0006468
Bva07g00238 392 ProSiteProfiles Protein kinase domain profile. 80 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g00238 392 ProSitePatterns Protein kinases ATP-binding region signature. 86 108 IPR017441 GO:0005524
Bva07g00238 392 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 375 - -
Bva07g00238 392 CDD STKc_IRAK 86 348 - -
Bva07g00238 392 SUPERFAMILY Protein kinase-like (PK-like) 67 370 IPR011009 -
Bva07g00238 392 Gene3D Transferase(Phosphotransferase) domain 1 156 357 - -
Bva07g00238 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Bva07g00238 392 SMART serkin_6 80 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00238 Bva-Chr7 3585627 3587397 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00238 14 392 Receptor kinase-like Gene Family AT4G21410 54.115 8.60e-149 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva07g00238 PK_Tyr_Ser-Thr 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00238 - - gmx:113000777 492.271