Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00236 ATGACTTCTAACGGCGGTGTGCCTCCGGGGTTTAGGTTTCATCCTACTGATGAAGAGCTCCTTCATTACTacttgaagaagaagctgTCCTTTCAGAAGTTTGAAATGGAGGTCATTAGAGAGGTGGACTTGAACAAGATGGAGCCTTGGGAGTTGCAAGAAAGATGCAAGATTGGATCAACCCCACAAAACGAGTGGTATTTCTTCAGTCACAAGGATAGAAAGTATCCAACAGGATCAAGGACAAACAGAGCAACGAATGCAGGGTTCTGGAAGGCAACAGGGAGAGACAAGTGCATTAGGAACAGCTACAAGAAGATTGGAATGAGGAAAACCCTCGTGTTCTACAGAGGAAGAGCTCCTCATGGCCAAAAGACTGATTGGATCATGCATGAGTATCGTCTTGAAGATGGCGATGAGGTAGATCCCAACGAAGATGGCTGGGTGATTTGCAGAgttttcaagaagaaaaacttattCAAGCTAGGAAATGAAGGAGGCCCTGCACATTATTCAGATCAACAACTCAATAACTCCTCAAATACCAATCAACCCCGGTCTTTAATTcctagagaaaataaatatttactaccAAACCCTAGGAACCCATCTGGTTTCGAACTTGATAAGCCAGAGCTTGCTTTGCATTATTCCCACTTGCAAAACCATCAATACTCGCTCTTCCAAGCTCAACCTCTTCCAACACACAAACCCATTGTTTATGACTACTCATCTTATGCATCAACCCTACCTTCTGAGTCACCTGTCATGGCAAAGCAGCTCATGTCAAACCCAAGAGATTGCGAGAGTGGTAGTGAAGGCTTAAGGTACCAAGTTTCAGAGCCTGGCTTGGAAGTTAGTACATGTGAAGTAGCACAAGAGATGGGAACAGGTAGAGTAGAAGGTATGAATGAATGGGGTGTGCTTGATAGGCTTGTCACTTCTCATCTCGGAAATGAAGATTCCGCTAAAGGGGTTAGGTTTGAGGATGCAAATGCACAGTCTGTACACCCAATCAACCAGCTCTCGTTGCGTGGAGAGATGGACTTCTGGGCCTATGGAAAGCAGTA 1070 0.4271 MTSNGGVPPGFRFHPTDEELLHYYLKKKLSFQKFEMEVIREVDLNKMEPWELQERCKIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNSYKKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLEDGDEVDPNEDGWVICRVFKKKNLFKLGNEGGPAHYSDQQLNNSSNTNQPRSLIPRENKYLLPNPRNPSGFELDKPELALHYSHLQNHQYSLFQAQPLPTHKPIVYDYSSYASTLPSESPVMAKQLMSNPRDCESGSEGLRYQVSEPGLEVSTCEVAQEMGTGRVEGMNEWGVLDRLVTSHLGNEDSAKGVRFEDANAQSVHPINQLSLRGEMDFWAYGKQ 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00236 356 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 322 - -
Bva07g00236 356 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Bva07g00236 356 SUPERFAMILY NAC domain 6 156 IPR036093 GO:0003677|GO:0006355
Bva07g00236 356 PANTHER PROTEIN BEARSKIN2-LIKE 4 322 IPR033519 -
Bva07g00236 356 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Bva07g00236 356 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00236 Bva-Chr7 3573994 3577427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00236 2 350 NAC Transcription Factor Family AT1G33280 57.183 3.73e-128 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva07g00236 NAM 1.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00236 - - gmx:100804181 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g00236 07 3573994 3577427 Bva07g00236 07 3573994 3577427 ECH