Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00228 atgTCTATCACTGAAGAACCTGCTACTCGGGTTACAGGATCCAAGCCATCCTCTAAACGGGTCTCCAGAAAACGTGCCCCAGAACCCGAGACAGCATTCCGCGGGGTGCGCAAACGGAGCTGGGGTCGGTATGTTTCGGAGATACGGTTACCGGGCCAGAAAACCCGGGTCTGGCTTGGATCATTTGGGTCTGCCGAGATGGCGGCTCGTGCTTACGACTCGGCGGCTTTCTTCTTGAAAGGACACTCGGCTAACCTTAATTTCCCCGACTTGGTTGGGTTACTGCCTCGTCCACGATCGTCGTCGAGGAAAGACATACAATCTGCGGCGGCTAAAGCTGCTTTTGAAGCGGTGGAGGAGCGGAGCAATCCGGGTCCGACCCGACCAGAAACGGATTCTTCCGAGTCCGATTTGATGGAATGGTGGGATAAGATTGGGGACTCTGTTTTGACGACGTCGTTTGATGATGTGAAGGAAGCACCCTTGTTGAGTCCCTTGAGGCTAGATACAAATCTGGGAGAGTTGCTGTGGAATGAAGAATTGGATTCTGAGCTTTTGATGGCATCAGGTTTCTA 575 0.527 MSITEEPATRVTGSKPSSKRVSRKRAPEPETAFRGVRKRSWGRYVSEIRLPGQKTRVWLGSFGSAEMAARAYDSAAFFLKGHSANLNFPDLVGLLPRPRSSSRKDIQSAAAKAAFEAVEERSNPGPTRPETDSSESDLMEWWDKIGDSVLTTSFDDVKEAPLLSPLRLDTNLGELLWNEELDSELLMASGF 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00228 191 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
Bva07g00228 191 PRINTS Ethylene responsive element binding protein signature 55 71 IPR001471 GO:0003700|GO:0006355
Bva07g00228 191 Gene3D AP2/ERF domain 32 90 IPR036955 GO:0003700|GO:0006355
Bva07g00228 191 MobiDBLite consensus disorder prediction 1 31 - -
Bva07g00228 191 MobiDBLite consensus disorder prediction 1 16 - -
Bva07g00228 191 SUPERFAMILY DNA-binding domain 32 90 IPR016177 GO:0003677
Bva07g00228 191 SMART rav1_2 32 95 IPR001471 GO:0003700|GO:0006355
Bva07g00228 191 ProSiteProfiles AP2/ERF domain profile. 32 89 IPR001471 GO:0003700|GO:0006355
Bva07g00228 191 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 17 137 - -
Bva07g00228 191 MobiDBLite consensus disorder prediction 116 136 - -
Bva07g00228 191 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF036-LIKE 17 137 - -
Bva07g00228 191 CDD AP2 33 91 IPR001471 GO:0003700|GO:0006355
Bva07g00228 191 Pfam AP2 domain 32 82 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00228 Bva-Chr7 3485405 3486169 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00228 32 114 AP2-EREBP Transcription Factor Family AT5G25810 65.060 1.12e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bva07g00228 AP2 1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00228 K09286 - zju:107407922 192.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g00228 07 3485405 3486169 Bva07g00228 07 3485405 3486169 ECH