Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00188 ATGGGAGAAGAAACTCATGCAGCAACAGAGACAGACGAGACATTCTTAACCTTACAAGGCCAAGCTAATATATGGAACTACATGTTCAGCTTTGCAGATTCCATGGCCCAGAAATCTGCTGTGGAGCTTCGTATACCCGATATCATACACCGTCACGGTGAACCAATCAGCTTAACCCAAATTATGGCTGGTATTTCTGATGCACCATCTCCAGACATCACGTGCCTCGCCCGCATCATGAGGCTGCTAGTCCGGAGAAAGATCTTCAGCTCACATCAGGCACCGGGCAGCGGAGACACACTCTACAGATTGACCCATTCTTCGAGATGGCTCTTAATTGAGTCCGGATCCGGGTCGGAGTCGAGCCTAGCCCCTATGGTTCTGATGGAGAACCATCCGTGGGCGACGGCGCCGTGGCATTGTCTGAGCCAATGCGTCAGGGAAGGTGGCTTTGCCTTCAAAAAGGCTCATGGGATAGTGATTTGGGAGTTTGCATCGGAGAATTCAGAGTTCAACAAGCTCCTCAATGATGGGATGGCGTACAGCTA 548 0.5073 MGEETHAATETDETFLTLQGQANIWNYMFSFADSMAQKSAVELRIPDIIHRHGEPISLTQIMAGISDAPSPDITCLARIMRLLVRRKIFSSHQAPGSGDTLYRLTHSSRWLLIESGSGSESSLAPMVLMENHPWATAPWHCLSQCVREGGFAFKKAHGIVIWEFASENSEFNKLLNDGMAYS 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00188 182 Gene3D - 6 111 IPR036388 -
Bva07g00188 182 PANTHER O-METHYLTRANSFERASE 17 180 IPR016461 GO:0008168
Bva07g00188 182 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 182 IPR016461 GO:0008168
Bva07g00188 182 SUPERFAMILY "Winged helix" DNA-binding domain 17 112 IPR036390 -
Bva07g00188 182 Pfam Dimerisation domain 35 84 IPR012967 GO:0046983
Bva07g00188 182 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 180 IPR029063 -
Bva07g00188 182 PANTHER (R,S)-RETICULINE 7-O-METHYLTRANSFERASE-LIKE ISOFORM X1 17 180 - -
Bva07g00188 182 Gene3D Vaccinia Virus protein VP39 117 182 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00188 Bva-Chr7 3010774 3011322 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00188 35 180 Monolignol Biosynthesis Gene Families AT5G54160 28.767 1.02e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00188 K22588 - qsu:111998612 228.024