Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00183 ATGGGAGTGGTTGATGACTTATCAAGGATTAGCAATGCCGCAACTTTTTTCCGAGATGCTGCCCAACTATGGTGGCGAAGAAAGCAtgcagaaaggaaaagaggcATATGTGTCATCAACTCATGCGAGCAGTTCAAGGCCGAACTACGCAAACACTTTGTTCCTCATAATGCCGATATTGAAGCAAGGGAAATGAGGGAGAAAGAAGCAAAGGAGTCCCAAGTAGACATGGGATCCTTGCAACACCTAGGGGTACTCTCTAAGATCTTCTCTCCAATAAATGTTGAGGAGAAAGGTCTATTATATGTTGATCTTACCATTGAAGGCAAGACAAGCTCTGCGATAATTGACACAGGAACTACACACAACTTCATTGATGCCCAAGAAGCCAAACGCTTAGGCATCACGTACAAGCAAGGGAGTGGTACCATCAAGGTTGTCAACTCAGAGGCAAAGCCAATTATGGGGATTGTCGAAGCAGTAAAGGTGAAGATTGGAGATTGGCAAGGTATGTTGGACTTCACCGTTATCCCTATGGATGACTTTCAGGGTCTAAGAAAGGATGAATGCTACGTTGCTACCGTAAGAGAATTGACTGATGAGGGAAACACAACTTGCCATAAGGAGTCATTGTCGTCATGCATCTTAGAAGTCCTTGATGAGTATAGAGATGTTATGCCTACTGAGTTGTCGAAGAAACTACCTCCTAGGAGAGAGGTAGACCATCAAATTGAGCTTGAACTAGGTGCTAAACCTCCTGCCATGGCACCTTATCAGATGTCCTTACGAAAAGTGCATAAAGGATTGGTGAGGCGATATGAAGGGCCCTTTCCCATCGTCAAGCAAGTAGGAAAGGTTGCCTATCAACTACAACTCCCGTCAAGGTTGAGGATTCATCCGGTTGTGCATGTGAGCCTCTTGAAGAATTATAATGCTGATGAAGAGGTTCCTTTAAGGAATATCTTAACACGTGCACCTACTGCTGTGATCACCGAGTCTgacaaggaagaagagaagattcTATCACATCGAGTGATCCGAAAAAGAGGAGTTTCATCATGCACTGAGTACCTTGTCAAATGGAAGGGCTTGCTAGATCACAAAGCAAGTTGGGAACGAGAGAACCTCCAATGGCAATTCCAAGATCACATTCAACGCTACAAGGAGGAAGACGTGACGAGGAAACATGAAGAAAGGTTTggaggagaaaaagagaaggtgCAGAGATGGAGAGATGCCTTAAGAGAAGTTGCTAGTGTCTCTGGTTGGGACTCCAAGGATCAGCAAGAAGCAGAACTGATTGAAAGAATTGTTGAACTTTGGATGCATGATTTGCTTCAAAAAATGGGCAAGAACATTGTTTTTGAAGAAGCTCCCAGTAATCCTGGCAGGAGGAGTAGGTTGTGGTCACAGAAAGATGTCAATAATGTATTGGTAAAAAATAAGGGAACTGAAGCAATTCAAGCGATAGTTTTGGAAGTACCTGGGGGATATGTGGCACACTGGGATCCTGAAGCCTTCTCAAAGACGAGTGAGCTGAAATTACTAAAGTTATGTAGTATGCAACTTCCCAATGGCCTCAAAAGTCTTCCTGGTGCACTAAGAGTTCTTGATTGGACATATTGTCCTTTAAAATCTATGCCACTTACCTTCCAACTGGATGAACTCGTTAACCTTAAATTGTGTCATAGTGAAATTGAACAGCTTTGGGAGGGAAGAAAGTTTTTTGAAGGCCTGAAGTTCATCAATCTGAGCCTTGctgttttgaatttaaagaaCTGCAAAAATCTTGTTTGCCTTCCAAGCACTATTCATAATTTGAAGTCCCTCAAGACTCTCAATATCTCTGGCTGTTCAAAAATTTCTAGATTGCCGGAAAATCTGAGGGAATGTAAGTGGTTGGAGGAACTTGATGTCAGTGAAACTGGTATTGAAGAAGTCCCTTCTTGCATTTTTGATCTAGAGAATGTTAAAGTATTATCCTTTGAGGGATGCCAAGGGTTAGTGTCCAAGTCATGGAATTGGTTTTTGCCTTTCGGGTGGATCTTTGGGAGTCATTCTGTTCCTAAAGGTTTTAGATTACCTCATTCCTGGTCAAATCTATCCTCACTGCAGAGATTAAATCTAAGTTATTGCAATCTCTCGGAAGGATCAATCCCCAGTGATATAGACTGCTTATCATCCTTGCAGAGTTTAAATCTCAGTGGCAACAATTTCGTTAGCCTACCTAATAGCATTTCTAAACTCTTGAAGCTGGAAGTTCTTTTCTTAGACTGTTGTGAGAAGCTGCAAGTACTGCCAGATCTTCCATTAAATATAGAGACATTATTTGCATGCAATTGTTATGCACTGGAAACTTCCAAATTCAATCCATCAAAGTCATGCAATGTCTTCGCATTGAGCAAAGAAAAAGTCTTCACTGGAAATGACCCTGACCCTTTGAATATGTTCATGGTAATTCAAAGATTCCTTCAGgaaattaaaattttcgaACCAAGATTTGAAATGCTTATCCGGGGGATATG 2525 0.4036 MGVVDDLSRISNAATFFRDAAQLWWRRKHAERKRGICVINSCEQFKAELRKHFVPHNADIEAREMREKEAKESQVDMGSLQHLGVLSKIFSPINVEEKGLLYVDLTIEGKTSSAIIDTGTTHNFIDAQEAKRLGITYKQGSGTIKVVNSEAKPIMGIVEAVKVKIGDWQGMLDFTVIPMDDFQGLRKDECYVATVRELTDEGNTTCHKESLSSCILEVLDEYRDVMPTELSKKLPPRREVDHQIELELGAKPPAMAPYQMSLRKVHKGLVRRYEGPFPIVKQVGKVAYQLQLPSRLRIHPVVHVSLLKNYNADEEVPLRNILTRAPTAVITESDKEEEKILSHRVIRKRGVSSCTEYLVKWKGLLDHKASWERENLQWQFQDHIQRYKEEDVTRKHEERFGGEKEKVQRWRDALREVASVSGWDSKDQQEAELIERIVELWMHDLLQKMGKNIVFEEAPSNPGRRSRLWSQKDVNNVLVKNKGTEAIQAIVLEVPGGYVAHWDPEAFSKTSELKLLKLCSMQLPNGLKSLPGALRVLDWTYCPLKSMPLTFQLDELVNLKLCHSEIEQLWEGRKFFEGLKFINLSLAVLNLKNCKNLVCLPSTIHNLKSLKTLNISGCSKISRLPENLRECKWLEELDVSETGIEEVPSCIFDLENVKVLSFEGCQGLVSKSWNWFLPFGWIFGSHSVPKGFRLPHSWSNLSSLQRLNLSYCNLSEGSIPSDIDCLSSLQSLNLSGNNFVSLPNSISKLLKLEVLFLDCCEKLQVLPDLPLNIETLFACNCYALETSKFNPSKSCNVFALSKEKVFTGNDPDPLNMFMVIQRFLQEIKIFEPRFEMLIRGI 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00183 841 SMART LRR_typ_2 634 654 IPR003591 -
Bva07g00183 841 SMART LRR_typ_2 607 631 IPR003591 -
Bva07g00183 841 SMART LRR_typ_2 726 749 IPR003591 -
Bva07g00183 841 SMART LRR_typ_2 701 725 IPR003591 -
Bva07g00183 841 Gene3D - 336 373 - -
Bva07g00183 841 ProSiteProfiles Chromo and chromo shadow domain profile. 335 399 IPR000953 -
Bva07g00183 841 Pfam Leucine Rich Repeat 556 572 IPR011713 -
Bva07g00183 841 Pfam Chromo (CHRromatin Organisation MOdifier) domain 338 389 IPR023780 -
Bva07g00183 841 Gene3D - 374 450 IPR035897 -
Bva07g00183 841 Gene3D Ribonuclease Inhibitor 490 804 IPR032675 -
Bva07g00183 841 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 439 569 IPR044974 GO:0006952
Bva07g00183 841 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 583 840 IPR044974 GO:0006952
Bva07g00183 841 SUPERFAMILY Acid proteases 99 180 IPR021109 -
Bva07g00183 841 SUPERFAMILY L domain-like 459 785 - -
Bva07g00183 841 Gene3D Acid Proteases 90 185 IPR021109 -
Bva07g00183 841 CDD retropepsin_like 103 183 - -
Bva07g00183 841 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 439 569 - -
Bva07g00183 841 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 583 840 - -
Bva07g00183 841 Pfam Aspartyl protease 103 180 - -
Bva07g00183 841 ProSiteProfiles Leucine-rich repeat profile. 728 749 IPR001611 GO:0005515
Bva07g00183 841 SUPERFAMILY Chromo domain-like 297 389 IPR016197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00183 Bva-Chr7 2972500 2982859 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00183 442 758 WRKY Transcription Factor Family AT4G12020 32.086 7.47e-33 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00183 - - twl:119989343 286.574