Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00177 ATGGCATTCAACAAGGACATCATGCTATCACTATGCCTTTTGGCCTTTCTCAGCTCATTCGTTTCTATCGCAGAAACTGTTTCACCAGTTCTTGATGTTTCTTCTCTCAATCGAACAAGCTTCCCAGAAGGCTTTATTTTTGGGACTGCATCCTCTGCATACCAGTCTGAAGGTGCTGCAAATACAGACGGAAGAGGACCAAGTATATGGGATAATTACACCCATCAATATCCTGagaaaataaatgatagaAGCAACGCAGATGTGGCAGTTGACGGATATCATCGCTACAAGGAAGATGTTGCCATCCAGAAGGATATGAATTTAGATGCTTACAGATTTTCCATATCTTGGTCTAGAATATTGCCAGAAGGAAAGCTATGTGGAGGTGTAAACCAAGAGGGAATCAAATATTACAACAACCTCATCAATGAGCTGTTGGCCAATGGTCTGCAACCATTTGTGaccctttttcattttgatgttCCCCACGCCTTAGAAGATGAGTACGGTGGTTTCTTAAGCCCTCAAATTGCCGCGGATTTTCAGGAGTATGCAGATATTTGCTTTAAGGAATTTGGCGACAGAGTGAAGTACTGGATCACTTTGAATGAGCCATGGACAGTGAGTCAGGGTGGCTATGCATCTGGCTCGATGGCACCGGGTCGCTGTTCTGATTGGATGAATCTAAATTGCACTGGTGGTGATACAGGGACAGAGCCTTATTTGGCTTCTCACAATCAACTTCTTGCTCATGCAGCTGCTGTGAGATTGTACAGAATCAACTATAAGGCATCTCAAAAGGGTTTGATAGGCATAACCTTGAATTCAAACTGGTATGTACCAGTGTCAGATAAAAAACCTGATCAAGATGCTGCTCAACGAGCTCTTGACTTCAATTATGGATGGTTTATGCAACCACTAACAACAGGCGAATACCCTGAAAGCATGCAATCTCTTGTGGGAACACGACTGCCCAAAttcactaaggagcaatctGATCTAGTTAGAGGATCATACGATTTTTTGGGGCTAAACTACTACACTGCCCAGTATGCTGCCAATACTGCTAAACCAAGCAATGCCAAACCCAGCTTTTTCACTGATTCTCTTGCCAATCTTACATTTGAGAATGCTGGAAAGCCCATTGGACCAAGGGCTGCTTCattttggttatatatttatccaaGAGGAATTTATGAATTGCTTGTCTACACAAAAAGAACCTACAATAACCCTTTAATCTACATTACTGAAAATggtatGGATGAGATCAACAATCCAACGCTGCCACTTGAGAAAGCTCTTATGGATACTAAGAGAGTTGAATTTTATCAACAACATCTCTATTATGTCAATAATGCAATCAAGCATGGTGTGAATATAAAAGGATATTTTGCTTGGTCATTGTTGGACACCTTTGAATGGCCTTCAGGATACACAGTCCGATTTGGATTGAATTTCGTGGATTTCGAAAATGGTTTGACAAGGTACCCGAAACTCTCTGCCAAATGGTTCAAGAATTTTCTCGACAAATGCTA 1541 0.3978 MAFNKDIMLSLCLLAFLSSFVSIAETVSPVLDVSSLNRTSFPEGFIFGTASSAYQSEGAANTDGRGPSIWDNYTHQYPEKINDRSNADVAVDGYHRYKEDVAIQKDMNLDAYRFSISWSRILPEGKLCGGVNQEGIKYYNNLINELLANGLQPFVTLFHFDVPHALEDEYGGFLSPQIAADFQEYADICFKEFGDRVKYWITLNEPWTVSQGGYASGSMAPGRCSDWMNLNCTGGDTGTEPYLASHNQLLAHAAAVRLYRINYKASQKGLIGITLNSNWYVPVSDKKPDQDAAQRALDFNYGWFMQPLTTGEYPESMQSLVGTRLPKFTKEQSDLVRGSYDFLGLNYYTAQYAANTAKPSNAKPSFFTDSLANLTFENAGKPIGPRAASFWLYIYPRGIYELLVYTKRTYNNPLIYITENGMDEINNPTLPLEKALMDTKRVEFYQQHLYYVNNAIKHGVNIKGYFAWSLLDTFEWPSGYTVRFGLNFVDFENGLTRYPKLSAKWFKNFLDKC 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00177 513 Pfam Glycosyl hydrolase family 1 39 511 IPR001360 GO:0004553|GO:0005975
Bva07g00177 513 SUPERFAMILY (Trans)glycosidases 28 511 IPR017853 -
Bva07g00177 513 PRINTS Glycosyl hydrolase family 1 signature 438 449 IPR001360 GO:0004553|GO:0005975
Bva07g00177 513 PRINTS Glycosyl hydrolase family 1 signature 415 423 IPR001360 GO:0004553|GO:0005975
Bva07g00177 513 PRINTS Glycosyl hydrolase family 1 signature 483 495 IPR001360 GO:0004553|GO:0005975
Bva07g00177 513 PRINTS Glycosyl hydrolase family 1 signature 459 476 IPR001360 GO:0004553|GO:0005975
Bva07g00177 513 PRINTS Glycosyl hydrolase family 1 signature 339 353 IPR001360 GO:0004553|GO:0005975
Bva07g00177 513 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 6 512 - -
Bva07g00177 513 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 45 59 IPR033132 -
Bva07g00177 513 Gene3D Glycosidases 26 511 - -
Bva07g00177 513 PANTHER GLYCOSYL HYDROLASE 6 512 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00177 Bva-Chr7 2930279 2935020 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00177 8 506 Glycoside Hydrolase AT5G42260 54.800 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00177 - K01188 gmx:100812431 733.791