Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00172 ATGGAAGAAGAAACTCATGCAGCAACAGAGACAGAGGAGATATTATTAACCTTACAAGGCCAAGCTAATATATGGAAGTACATGTTAAGCTTTGCAGATTCCATGGCCTTGAAATCTGCGGTGGAGCTTCGTATACCCGATATCATACGCCGTCACGGTGGACCAATCAGCTTAACCCAAATTTTGGCAGGTATTTCTGATGCACCATCTCCAGACATCACGTGCCTCGCGCGTATCATGAGGCAGCTGGTCCGGAGAAAGATCTTCAGCGCACATCAGGCAATCGACGCTGTAGACACACTCTACGGATTGACCCACTCTTCAAGATGGCTCTTCAGTGAGTCCGGATCCGGGTCGGAGCCGAGCCTGGCCCCGATGGTTTTGATAGACAACCATCCGTGGGCGATGGCGCCGTGGCACTATCTGAGCCACTGCGTCAGGGAAGGCGGCTTTGCCTTCAAAAAGGCTCATGGGAGGGAGATTTGGGAGTTTGCATCGGAGAATTCAGAGTTTAACAAGCTCTTCAATGATGGGATGGCGTGTACGGCCAAGATTGTGATGAGCGCAATCATCTCAGGTTACAAAGATGGGTTCGAGAGCGTTGGATCACTGGTAGATGTAGGAGGTGGGATCGGTGAGACAGTGTCTGAGGTCGTGAAATCCTATCCGCACATCAAGTGCATAAACTTTGATCTGCCGCACGTTGTTGCAAATGCGTCTAAATGCGAGGGAGTCACTCATGTTGGAGGCGATATGTTCCAAGCCATTCCCAAGGCCGACGCCGTTTTCATGaagTGGATAATGCATAATTGGAGCGATGAAAGTTGTATCAAGATTTTGACGAACTGCAAGGAAGCAATAGCAGAAGAGACAGGGAAAGTTATCATTGTGGACCATGTTCTAAAGCCAGAGGGTGATGGCCTTTTCGACGACACTGGTTTTGTCTCTGATTTGCTTATGCTTGCACATGGCTCAGGTGGAAGGGAGAGGACTGAGTCAGAGTGgaagaaaatattacaagAAGCAGGTTTCCCTCGTTATAAAATCATCACAATCAAAGCTTTGCCATCAATTATTGAGGCCTACCCTATTTG 1094 0.4781 MEEETHAATETEEILLTLQGQANIWKYMLSFADSMALKSAVELRIPDIIRRHGGPISLTQILAGISDAPSPDITCLARIMRQLVRRKIFSAHQAIDAVDTLYGLTHSSRWLFSESGSGSEPSLAPMVLIDNHPWAMAPWHYLSHCVREGGFAFKKAHGREIWEFASENSEFNKLFNDGMACTAKIVMSAIISGYKDGFESVGSLVDVGGGIGETVSEVVKSYPHIKCINFDLPHVVANASKCEGVTHVGGDMFQAIPKADAVFMKWIMHNWSDESCIKILTNCKEAIAEETGKVIIVDHVLKPEGDGLFDDTGFVSDLLMLAHGSGGRERTESEWKKILQEAGFPRYKIITIKALPSIIEAYPI 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00172 364 Gene3D - 5 111 IPR036388 -
Bva07g00172 364 PANTHER O-METHYLTRANSFERASE 15 363 IPR016461 GO:0008168
Bva07g00172 364 PIRSF O-mtase 1 364 IPR016461 GO:0008168
Bva07g00172 364 Pfam Dimerisation domain 35 84 IPR012967 GO:0046983
Bva07g00172 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 362 IPR029063 -
Bva07g00172 364 Gene3D Vaccinia Virus protein VP39 117 364 IPR029063 -
Bva07g00172 364 PANTHER (R,S)-RETICULINE 7-O-METHYLTRANSFERASE-LIKE ISOFORM X1 15 363 - -
Bva07g00172 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 363 IPR016461 GO:0008168
Bva07g00172 364 Pfam O-methyltransferase domain 139 344 IPR001077 GO:0008171
Bva07g00172 364 SUPERFAMILY "Winged helix" DNA-binding domain 17 114 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00172 Bva-Chr7 2900585 2902170 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00172 35 350 Monolignol Biosynthesis Gene Families AT5G54160 40.498 3.24e-79 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00172 K22588 - qsu:111998567 516.924