LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva07g00167	ATGGGAGAAGAAAGTCATGCAGCAACAGAGACAGAGGAGACATTATTAACCTTACAAGGCCAAGCTAATATGTGGAACTACATGTTCAGCTTTGCAGATTCCATGGCCTTGAAATCTGCTGTGGAGCTTCATGTAGGACGTGGGATAGGTGAGGCAGTGTCTGAGATCGTGAAATCCTATCCGCATATCAAGTGCATAAACTTCGATCTGCCGCACGTTGTTGCAACTGCGTCTAAATACGAGGGAGTCACTCATGTTGGAGGCGACATGTTGCAACATGTTCCAAGCCATTCCCAAGGCCGACGCCATTTACATGaagATTTTGAAGAAGTGCAAGGAGGTAATACcagaagagaaagggaaagttCTGATGTGGACTTTGCTCTAAAGCCAGAGGGTGATGGCATTTTAGACGACACTGGTTTTGTCTTTGATCTGCTTATGATTGCATATGCCTCAGGTGGAAGGGAGAGGACCGAGTTGGAGTGGATGAAAATATTACAAGAAGCTGGTTTCCCTTGTTATAGCATCATTACAATCAAAGCTTTGCTATCAATTATTGAGGCCTACcctatttg	578	0.4239	MGEESHAATETEETLLTLQGQANMWNYMFSFADSMALKSAVELHVGRGIGEAVSEIVKSYPHIKCINFDLPHVVATASKYEGVTHVGGDMLQHVPSHSQGRRHLHEDFEEVQGGNTRRERESSDVDFALKPEGDGILDDTGFVFDLLMIAYASGGRERTELEWMKILQEAGFPCYSIITIKALLSIIEAYPI	192

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva07g00167	192	PANTHER	(R,S)-RETICULINE 7-O-METHYLTRANSFERASE-LIKE ISOFORM X1	44	191	-	-
	Bva07g00167	192	ProSiteProfiles	SAM-dependent O-methyltransferase class II-type profile.	1	191	IPR016461	GO:0008168
	Bva07g00167	192	PANTHER	(R,S)-RETICULINE 7-O-METHYLTRANSFERASE-LIKE ISOFORM X1	16	45	-	-
	Bva07g00167	192	PANTHER	O-METHYLTRANSFERASE	16	45	IPR016461	GO:0008168
	Bva07g00167	192	PANTHER	O-METHYLTRANSFERASE	44	191	IPR016461	GO:0008168
	Bva07g00167	192	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	43	190	IPR029063	-
	Bva07g00167	192	Gene3D	Vaccinia Virus protein VP39	43	96	IPR029063	-
	Bva07g00167	192	Gene3D	Vaccinia Virus protein VP39	123	192	IPR029063	-
	Bva07g00167	192	Pfam	O-methyltransferase domain	8	96	IPR001077	GO:0008171

Showing 1 to 9 of 9 entries

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva07g00167	Bva-Chr7	2848829	2850281	Proximal

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva07g00167	43	191	Monolignol Biosynthesis Gene Families	AT1G51990	33.728	8.61e-20	83.6

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva07g00167	K22588		-	qsu:111998592	163.31

Showing 1 to 1 of 1 entries