Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00161 ATGGAGCTTTTTGCTAAACcaattatcttcttctttcttctcattctgTTTACTAGCTGGGGCTTCTTGGCTTGCAGAACAGAAGATTGTGGTGGGCAGAGAGTAGCATATACCATTATTGTTGATCACTATGGTAGGGGAAAATTCAGCACAGTTCAAGCTGCCATTGATTCTGTTCCAGTAAACAATTTCAGATGGGTCAAAATCCACATAAGACGTGGGGTATACATAGAAAAGGTTCATGTTCCTTTTAATAAACCATGCATCATTTTAGAAGGTGAAGGCAGAGGAATCACCACCATTACATACAACGACCGCGAACAGACAGATAGATCCGCAACATTCATTTCATCCCCAAACAATAACTCTTTCGATGTGCTAGAACCATTGGTTTTGAACCATGGGACATTGGGAAGTGGCACGATCACACAAGCAGTGGCAGCAATCATATATGGAGACAAATCTGCGTTTTTTGATTGTGGTTTCGTGGGTTTTCAAGATACATTATGGGACGCATTGGGACGACATTACTTTAATAATTGCATTATACAAGGAGCtgttgatttcatttttggcaCTGGCCAATCCTACTATGAGGGTTGTCTGCTCAACGTTACATCTGCGGGTTTTGTAACAGCCCAAGGCCGAAACTCAGCGAATGACCCAAGTGGTTTTGTGTTCAGAAAGTGTTCTGTTGTTGGGAGTGGCAATGGTCAAGTGATGTTAGGAAGAGCCTATGGTTCTTATTCTAGAGTTATATTTCATGGAACATACATGGGTGCTGTGGTTAACCCCCAGGGATGGAATTCTTGGCATTACATTGGACAAGAGAGTAAGTTCTCATATGCTGAGGTTCAGTGCAAAGGGCCAGGGGCCAATACTGTGGGGCGCGTCCCCTGGGAGAAGAAGCTTACTGGTTCACAGCTAAAACAATTTTCCAAGGCATATTTCATCAACCAAGATGGGTGGCTTGATAAATTACCGATATG 989 0.4115 MELFAKPIIFFFLLILFTSWGFLACRTEDCGGQRVAYTIIVDHYGRGKFSTVQAAIDSVPVNNFRWVKIHIRRGVYIEKVHVPFNKPCIILEGEGRGITTITYNDREQTDRSATFISSPNNNSFDVLEPLVLNHGTLGSGTITQAVAAIIYGDKSAFFDCGFVGFQDTLWDALGRHYFNNCIIQGAVDFIFGTGQSYYEGCLLNVTSAGFVTAQGRNSANDPSGFVFRKCSVVGSGNGQVMLGRAYGSYSRVIFHGTYMGAVVNPQGWNSWHYIGQESKFSYAEVQCKGPGANTVGRVPWEKKLTGSQLKQFSKAYFINQDGWLDKLPI 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00161 329 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Bva07g00161 329 PANTHER PECTINESTERASE 10 328 - -
Bva07g00161 329 ProSitePatterns Pectinesterase signature 2. 183 192 IPR033131 -
Bva07g00161 329 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 10 328 - -
Bva07g00161 329 Pfam Pectinesterase 39 320 IPR000070 GO:0030599|GO:0042545
Bva07g00161 329 SUPERFAMILY Pectin lyase-like 34 327 IPR011050 -
Bva07g00161 329 Gene3D - 32 329 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00161 Bva-Chr7 2783071 2786265 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00161 10 277 Carbohydrate Esterase AT2G19150 41.667 7.95e-64 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00161 - - gmx:100800737 363.614