Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00144 ATGCGGTTTTCTAGTCTGACTCGATTAAGCCTCAGCCTGAAGCGGGTTAGTCCGAAGCGGACTGGAAAACCAGTTTTACAAGCTCTAGGAGCAACACGGAAACAAAAGGGCGCAATCTTCTTTGGCAGCGGCCGAGAATCTGAGTCATTGACAATGGTGAGGGTCAGTGTTTTGAATGATGCCCTCAAGAGCATGTACAATGCTGAGAAACGGGGGAAACGTCAGGCCATGATTAGACCATCCTCAAAAGTGATTATTAAGTTCCTCTTGGTGATGCAGAAGCATGGATACATTGGAGAGTTTGAATATGTTGATGACCACAGGGCTGGAAAAATCGTGGTTGAACTGAATGGAAGATTGAACAAGTGTGGGGTTATTAGTCCCCGTTTTGATGTGGGAGTTAAAGAAATAGAAGGCTGGACTGCAAGGCTGCTTCCCTCCAGACAGTTTGGCTACATTGTCTTGACTACCTCAGCTGGTATTATGGACCACGAAGAGGCTAGGAGAAAAAATGTTGGTGGTAAAGTACTAGGGTTCTTTTACTA 545 0.455 MRFSSLTRLSLSLKRVSPKRTGKPVLQALGATRKQKGAIFFGSGRESESLTMVRVSVLNDALKSMYNAEKRGKRQAMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00144 181 Gene3D - 52 120 - -
Bva07g00144 181 Pfam Ribosomal protein S8 58 181 IPR000630 GO:0003735|GO:0005840|GO:0006412
Bva07g00144 181 PANTHER BNAA02G06730D PROTEIN 52 181 - -
Bva07g00144 181 Gene3D - 121 181 - -
Bva07g00144 181 PANTHER 40S RIBOSOMAL PROTEIN S15A 52 181 IPR000630 GO:0003735|GO:0005840|GO:0006412
Bva07g00144 181 SUPERFAMILY Ribosomal protein S8 55 181 IPR035987 GO:0003735|GO:0005840|GO:0006412
Bva07g00144 181 ProSitePatterns Ribosomal protein S8 signature. 151 168 IPR000630 GO:0003735|GO:0005840|GO:0006412
Bva07g00144 181 Hamap 30S ribosomal protein S8 [rpsH]. 53 181 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00144 Bva-Chr7 2580170 2582859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00144 52 181 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 96.923 3.35e-93 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00144 K02957 - thj:104809034 260.381