Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00103 ATGCCTATCGAATGGGAGAATTTCCGTGGTGGTTTGATACAATATGGACAAATGCACTACAAATTTTTCTATCTGTATGTGTCCTTGGGTGTTGTGGGTCTTGGTGCTCTTCCAGGCATAGTCTTCCTTTGTATCTATGTGATTGTCAATGTACCTTTTGCAAAGTTCTTACAAAAGTGTAGGAACGAACTTATGATTGCACAGGATGAGCGTCTAAGATCAACTTCAGAGATCCTAAAtagcataaaaattataaagtttcaGTCCTGGGAGGATAAATTCAAGAACTTGGTTGAATCCCTACGCGCTAGAGAGTTCAAATGGCTGGCTGAGTCACAGTTGAAGAAAGCTGTTggcacatttattttttggatgtCGCCTACTATCATTTCTTCAGTTATTTTCCTGGGATGTGCCATCTTCAAGAGTGTTCCATTAAATGCTGGAACCATCTTTACAGTTCTTGCAACATTGAGGAGAATGTCAGATCCTGTTTCAACGATTCCTGAAGCCCTTTCAGTTATGATCCAAGTTAAGATCTCTTTTGATCGTCTAAACAACTTTTTGCTTGATGATGAGCTAAAGAATGATGATGCCAGAAGAAACTCAAAGCAGAACTCAGTAAACAGTGTTAAAATTCAAGAAGGCGATTTCTGCTGGGATCAGGAACTGGTTTTGTGGGCAGTTGGAGCTGGAAAGTCATCTCTATTATATGCAATACTTGGAGAGATGCCGAAAATATCAGGAAAGGCTCATGCAGGTGGAACCCTTGCCTACGTTTCTCAAGCTTCTTGGATCCAAAGTGGGACGGTTCGTGAGAATATACTATTTGGAAAACCAATGGACAAAACCAGATATGAGAATGCAATCAAAGTTTGTGCCCTAGATAAAGATATTAATGGTTTTAGCCATGGTGACCACACAGAAATCGGTCAGAGAGGGATTAACTTGAGTGGAGGACAAAAGCAAAGGATTCAACTAGCTCGAGCTGTCTACAACGATGCAGATATTTATCTCCTTGATGACCCTTTCAGTGCAGCGGATGCACATACCTCTTCTATTCTCTTCAATGACTGTGTCATGACAGCtctaagaaagaaaacagtcATTCTGGTGACTCATCAAGTTGAATTTCTCTCACAAGTTGATAAAATCCTGGTAATGGGAGGAGGAAAAATTACTCAGTCAGGTGGTTATGAGGATCTCTTGACCTCTGGGACGGCCTTTGAACGACTAGTGAATGCTCATAAAGAGACAGTTACAGGGTTGGatcaacataaagaaaatcaagGGGAATCCCAAAATGTTGTTACAATTGAGCCTGAGGAGTCTCACAGTTTTCATCTCACTAAGGATAAGAGTGAGGGGGAGAATTCCTCTAAGGGTTACCCCGGGGGACAACtcacaaaagaagaagaaaaggagacCGGGGATGTTGGATGGAGGCCATTCTGGGATTATATTGTTATCTCCAAGGGATCAATGCTTCTATGTTTGATCATATTAGCACAATTGGCTTTTTTAGCTTTACATGGTGTAGCTACTTTTTGGCTTGCTCTAGCCATTGAAATTCCAAAAGTAACTAGTGGCATTTTGATTGGAGTTTACACAGCAGTTTCATTTCTTAGTGTTGCCTTTGTATATCTAAGGTCTTTCTTTGGTGCCCATCTTGGACTACGAGCTTCTACAGCCTTCTTCTCTGGTTTTACTAATGCTATTTTCAATGCTCCTATGCTGTTCTTTGACTCAACCCCGGTAGGACGGATTTTGACCCGAGCATCATCAGATTTAACAATTGAAATTGTGATGACGATTGGTATAGTGGCTTCAGTCACTTGGGAAGTCGTCATTGTTGCTGTTTTAACCATAGTCGCTTCAAAATTCATCCAGGGCTATTATGACGCCTCTGCAAGAGAACTCATAAGGATTAATGGAACAACGAAAGCTCCGGTTATGAATTTTACAGCTGAGACATCACTTGGAGTGGTGACTACAAGAGCTTTCGACATGATAGAAAGATTTTTCCATTGCTACATAAAGCTGGTAGACACAGATGCAAAAATGTTCTTTCATTCCAATGCTCTAATGGAATGGTTAGTTTTAAGGATTGAAATACTTCACAATTTGATTCTCTTCACTGTGGCTACACTATTTGTTTTCCTTCCAAATGGATACATAGCTCCTGAAATCCTAATAATTCTCTGGACATCTTTTTTGTCTGTTGGCCTTGTGggactttctctctctaatgcTTTGACAATAACAGTAAACCAAGTTTTTCTCACAAGATGGTTTTGCAACTTATCAAACTATATCATTTCTGTTGAACGGATCAAACAATTCATCCACATACCAGCAGAGCCTCCTGCAATTGTGGAGGACAATAGGCCACCTTCTTCATGGCCTTCCAAGGGTAGGATAGATCTAAAAGCCCTCCAGATTAGATATCGTCCAAATGCTCCAATAGTACTTAAAGGAATTACTTGTACTTTCAGAGAAGGGAACCGAGTTGGAGTCGTGGGAAGGACTGGAAGTGGAAAAAGTACACTCATAAGTGCTTTGTTTCGCTTAGTTGATCCTGCAGCTGGAGAGATCTTTATAGATGGCCTTAACATATGCTCAATTGGGCTGAAGGATTTGAGGATGAAGCTAAGCATCATTCCTCAAGAACCAACACTTTTCAAGGGTAGCATTAGAACTAACTTGGACCCTCTTGGCCTGTATTCTGATGATGAAATATGGAGGGCTTTAGAGAAATGTCAGCTTAAATCAACAATTGCAAAACTACCAAATCTCTTGGACTCTTCTGTGAGTGATGAAGGCGAAAATTGGAGCATGGGACAGCGACAACTCTTTTGTCTTGGAAGAGTGCTTCTTAAGAGGAATAGaattcttgttcttgatgaAGCTACTGCTTCCACTGATACCGCCACAGATGCCATTCTACAACGAGTTATTAGACAGGAATTTGAGCAATGCACTATGATAACAGTGGCTCACAGAGTTCCAACTGTGATAGATAGTGACATGGTCTTGGTCCTCTCTGATGGGCAACTGGTTGAATATGATGAGCCTTCAAAGCTTATAGAGACCAACTCTTCATTCTCTAAGCTGGTAGCGGAAATATTAACAGCCACGTA 3140 0.3927 MPIEWENFRGGLIQYGQMHYKFFYLYVSLGVVGLGALPGIVFLCIYVIVNVPFAKFLQKCRNELMIAQDERLRSTSEILNSIKIIKFQSWEDKFKNLVESLRAREFKWLAESQLKKAVGTFIFWMSPTIISSVIFLGCAIFKSVPLNAGTIFTVLATLRRMSDPVSTIPEALSVMIQVKISFDRLNNFLLDDELKNDDARRNSKQNSVNSVKIQEGDFCWDQELVLWAVGAGKSSLLYAILGEMPKISGKAHAGGTLAYVSQASWIQSGTVRENILFGKPMDKTRYENAIKVCALDKDINGFSHGDHTEIGQRGINLSGGQKQRIQLARAVYNDADIYLLDDPFSAADAHTSSILFNDCVMTALRKKTVILVTHQVEFLSQVDKILVMGGGKITQSGGYEDLLTSGTAFERLVNAHKETVTGLDQHKENQGESQNVVTIEPEESHSFHLTKDKSEGENSSKGYPGGQLTKEEEKETGDVGWRPFWDYIVISKGSMLLCLIILAQLAFLALHGVATFWLALAIEIPKVTSGILIGVYTAVSFLSVAFVYLRSFFGAHLGLRASTAFFSGFTNAIFNAPMLFFDSTPVGRILTRASSDLTIEIVMTIGIVASVTWEVVIVAVLTIVASKFIQGYYDASARELIRINGTTKAPVMNFTAETSLGVVTTRAFDMIERFFHCYIKLVDTDAKMFFHSNALMEWLVLRIEILHNLILFTVATLFVFLPNGYIAPEILIILWTSFLSVGLVGLSLSNALTITVNQVFLTRWFCNLSNYIISVERIKQFIHIPAEPPAIVEDNRPPSSWPSKGRIDLKALQIRYRPNAPIVLKGITCTFREGNRVGVVGRTGSGKSTLISALFRLVDPAAGEIFIDGLNICSIGLKDLRMKLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWRALEKCQLKSTIAKLPNLLDSSVSDEGENWSMGQRQLFCLGRVLLKRNRILVLDEATASTDTATDAILQRVIRQEFEQCTMITVAHRVPTVIDSDMVLVLSDGQLVEYDEPSKLIETNSSFSKLVAEILTAT 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00103 1046 SUPERFAMILY ABC transporter transmembrane region 483 789 IPR036640 GO:0005524|GO:0016021
Bva07g00103 1046 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 22 177 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva07g00103 1046 ProSitePatterns ABC transporters family signature. 317 331 IPR017871 GO:0005524
Bva07g00103 1046 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 809 1041 IPR003439 GO:0005524
Bva07g00103 1046 Pfam ABC transporter 824 972 IPR003439 GO:0005524
Bva07g00103 1046 MobiDBLite consensus disorder prediction 447 474 - -
Bva07g00103 1046 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 188 415 IPR003439 GO:0005524
Bva07g00103 1046 CDD ABCC_MRP_domain2 805 1025 - -
Bva07g00103 1046 SMART AAA_5 833 1025 IPR003593 -
Bva07g00103 1046 SMART AAA_5 221 392 IPR003593 -
Bva07g00103 1046 Gene3D - 210 440 IPR027417 -
Bva07g00103 1046 SUPERFAMILY ABC transporter transmembrane region 28 191 IPR036640 GO:0005524|GO:0016021
Bva07g00103 1046 Pfam ABC transporter 230 344 IPR003439 GO:0005524
Bva07g00103 1046 CDD ABCC_MRP_domain1 211 392 - -
Bva07g00103 1046 Gene3D - 790 1042 IPR027417 -
Bva07g00103 1046 Gene3D ABC transporter type 1, transmembrane domain 20 198 IPR036640 GO:0005524|GO:0016021
Bva07g00103 1046 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 499 770 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva07g00103 1046 CDD ABC_6TM_ABCC_D2 493 782 IPR044726 GO:0140359
Bva07g00103 1046 Gene3D ABC transporter type 1, transmembrane domain 463 788 IPR036640 GO:0005524|GO:0016021
Bva07g00103 1046 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 228 415 IPR027417 -
Bva07g00103 1046 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 797 1039 IPR027417 -
Bva07g00103 1046 Pfam ABC transporter transmembrane region 499 716 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva07g00103 1046 Pfam ABC transporter transmembrane region 36 157 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva07g00103 1046 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 22 1042 - -
Bva07g00103 1046 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 22 1042 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00103 Bva-Chr7 2141955 2146802 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00103 257 508 Calmodulin-binding Proteins AT2G36910 24.382 7.27e-19 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00103 - - gmx:100790301 1455.27