Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00070 ATGGGAATTCGGAGATTGACAGTTTGCATGGTGTCGGCTCTGAGATCGCGTCTGGATCCACTTGAAAACCCACCTCCCGTAGCAGAGCTTTTCAGCAAGGAACACAACGAGTCGACTCAGAAGCTCTTCGACATAGCGCCCTGCTTCAAGGTTGGGTTCATGGCTGCCAATCTTGCCATCCTCGAAGCTGCATTAGAGGATAAAACCGAGAATAGTACCAAGCTCCGTgttgttgattttgatatcGGGCAGGGGAGCCAGTGCATGAATCACTTACACGCGCTGTCTTCGCGCCAGAATGGGAAACCAGTCACGGTGAAGGTCACCGCTGTAGCCGAGAATGGTGGCGAAGAAAGGTTGAAGCCGGTGGGTGATATGCTGAAAAAACTAGCAGTCCAGTTCGGGGTTGGCTTCGAATTCAATTTGTTCACTCAAAAACTCGGGGAGCTGACTTGCGAGACTCTGGGTTGCGAGCCCGACGAGTCACTGGCAGTGAATtttgtaacaccttattttaatttttatatttatggaaaacacttttatttgactcaattcaataaggtcattatcaaata 578 0.4377 MGIRRLTVCMVSALRSRLDPLENPPPVAELFSKEHNESTQKLFDIAPCFKVGFMAANLAILEAALEDKTENSTKLRVVDFDIGQGSQCMNHLHALSSRQNGKPVTVKVTAVAENGGEERLKPVGDMLKKLAVQFGVGFEFNLFTQKLGELTCETLGCEPDESLAVNFVTPYFNFYIYGKHFYLTQFNKVIIK 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00070 192 Pfam GRAS domain family 3 173 IPR005202 -
Bva07g00070 192 PANTHER SCARECROW-LIKE PROTEIN 8 4 167 IPR030013 -
Bva07g00070 192 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 167 IPR005202 -
Bva07g00070 192 ProSiteProfiles GRAS family profile. 1 192 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00070 Bva-Chr7 1634523 1635101 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00070 10 175 GRAS Transcription Factor Family AT5G52510 50.000 4.16e-44 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva07g00070 GRAS 1e-33 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00070 - - pvy:116133620 197.978