Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00069 ATGACGCTGGTGGAACAAGAGATGAACACCAATACGGCGCCATTCATGGCTCGATTTACCAAGTCATTCTCATATTACGGTGCTCTGTTTGACTCAATCGAGTCAATAACACCGAGGGATCACCCGGACCGAGTCAAAGTAGAGGAAGGACTGATTAAAACCAATGAGTTAGGGCATCGCCGACTCAATCCTGTCAAACCAATTAACCCGGGCTTTACTGTCAAAGAGGGGAATGGTGGGATTTGCTTCGGTTGGATGGGTCAGACTCTCACCGTCGCATCTCCTTGGCGTTA 293 0.4881 MTLVEQEMNTNTAPFMARFTKSFSYYGALFDSIESITPRDHPDRVKVEEGLIKTNELGHRRLNPVKPINPGFTVKEGNGGICFGWMGQTLTVASPWR 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00069 97 PANTHER SCARECROW-LIKE PROTEIN 8 1 53 IPR030013 -
Bva07g00069 97 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 53 IPR005202 -
Bva07g00069 97 ProSiteProfiles GRAS family profile. 1 97 IPR005202 -
Bva07g00069 97 Pfam GRAS domain family 1 53 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00069 Bva-Chr7 1628526 1628904 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00069 1 97 GRAS Transcription Factor Family AT5G52510 40.299 2.43e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva07g00069 GRAS 7.9e-14 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00069 - - rcu:8277111 119.012