Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00026 ATGGCTTCTCTTTCAGAAGCTCCACACATGGAGTCTTTCATGTCGTTTCCACCTGGATTCAAATTTTGCCCAACCGATCAAGAGcttatttacttttacttgAGGAAGAAAGTCAATAATGAAAATCTTCCAACCAATCCGATAAAGGAAGTAAATATATACCTTTACAATCCAGAGGATTTGGCAAGTAAAGATAGGAGCTTTATGATGTTTTTCCCTAGCTATTACCTCTTTTTCATACTCAACCAAAATTATtg 257 0.3385 MASLSEAPHMESFMSFPPGFKFCPTDQELIYFYLRKKVNNENLPTNPIKEVNIYLYNPEDLASKDRSFMMFFPSYYLFFILNQNY 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00026 85 PANTHER NAC DOMAIN-CONTAINING PROTEIN 102-LIKE 8 72 - -
Bva07g00026 85 ProSiteProfiles NAC domain profile. 16 85 IPR003441 GO:0003677|GO:0006355
Bva07g00026 85 PANTHER NAC TRANSCRIPTION FACTOR 56 8 72 - -
Bva07g00026 85 Gene3D NAC domain 25 85 IPR036093 GO:0003677|GO:0006355
Bva07g00026 85 Pfam No apical meristem (NAM) protein 17 67 IPR003441 GO:0003677|GO:0006355
Bva07g00026 85 SUPERFAMILY NAC domain 9 82 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00026 Bva-Chr7 877014 877271 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00026 14 85 NAC Transcription Factor Family AT3G17730 39.726 1.42e-12 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva07g00026 NAM 6.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00026 - - ming:122093525 76.6405