Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00021 ATGGCCTCTCTTTCAGAAGCACCACACATGGAGTCTTTCATGTCTTTTCCACCTGGATTCAAGTTTTACCCAACCGATCAAGaacttatttacttttacttgaggaagaaaatcaataaagaaaaacttccAACCAATCCGATAAGGGAAGTAAATATATACCTTTACAATCCAATAGATTTGGCAGCAATGTACAGAGATTATGAAGGGCACGATGGATGGTATTTTTTGACCCCAAGGGATCAAAAATATCCAAACGAAAAACGACCAAATCGATCAGCAAATAATGGTTATTGGAAAGCTACGGGAGCTGATAAAGAAGTTTGTCATGGAGATCAAATTATTGGGTACAAGAGGACATTGGTTTTCTATCATGGGAAGCCTCCCAAGGGTACAAAGACTGATTGGATCATGCATGAATATACATTGAAGGAGCCTATTAGAACCAGAACCAGTCCCAATGATATGAAGCTGGATGAGTGGGTTTTGTGTAAGATTTACGAGAGAAGAAAGAGGTTAGAAGATGCTGAAGACAATGATCAGACTCAATTGTCAACTTTGTCTCAATATCTGTTGCATCCATTGCACCAGCTACTTCCTCAAGTTCCTTCGGAGGTTTCTCAAAAGCTGCAGCAGACTCCTCCGCCACCATCTCAGCCTCCACAATTGGTCACTTCCCTTCATACAGATGCACATGAAGTGAACACGTACAGTTTTGGGCAACTTTCCCCATGGAACAACCCTCAACCAATATTGTTGTCCCCTCTGCCACTTTCTCAACCTTA 785 0.3962 MASLSEAPHMESFMSFPPGFKFYPTDQELIYFYLRKKINKEKLPTNPIREVNIYLYNPIDLAAMYRDYEGHDGWYFLTPRDQKYPNEKRPNRSANNGYWKATGADKEVCHGDQIIGYKRTLVFYHGKPPKGTKTDWIMHEYTLKEPIRTRTSPNDMKLDEWVLCKIYERRKRLEDAEDNDQTQLSTLSQYLLHPLHQLLPQVPSEVSQKLQQTPPPPSQPPQLVTSLHTDAHEVNTYSFGQLSPWNNPQPILLSPLPLSQP 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00021 261 PANTHER NAC DOMAIN-CONTAINING PROTEIN 102-LIKE 8 190 - -
Bva07g00021 261 ProSiteProfiles NAC domain profile. 16 169 IPR003441 GO:0003677|GO:0006355
Bva07g00021 261 MobiDBLite consensus disorder prediction 204 224 - -
Bva07g00021 261 SUPERFAMILY NAC domain 9 167 IPR036093 GO:0003677|GO:0006355
Bva07g00021 261 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Bva07g00021 261 PANTHER NAC TRANSCRIPTION FACTOR 56 8 190 - -
Bva07g00021 261 Gene3D NAC domain 25 174 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00021 Bva-Chr7 797220 798749 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00021 15 170 NAC Transcription Factor Family AT1G69490 51.592 5.53e-54 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva07g00021 NAM 1.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00021 - - ming:122059129 206.453