Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00020 ATGGCTTCTCTTTCAGAAGCTCCACACATGGAGTCTTTCATGTCGTTTCCATCTGGATTCAAGTTTTGCCCAACCGATCAAGAGcttatttacttttacttgAGGAAGAAAGTCAATAATGAAAGTCTTCCAACCAATCCGATAAGGGAAGTAAATATATACCTTTACAATCCAGTAGATTTGCTGGATGAGTGGGTTTTGTGTAAGATTTACGAGAGAAGAAAGGGGTTAGAAGATGCTAAAGACAATGATCAGACTCAATTGTCAACTTTGTCTCAATATCTACTGCATCCATTGCACCAGCTACTTCCTCAAGTTCCTTCTGAGCTTCCTCAAAAGCCACAGCAAACTCCTCCGCCACCATCTCATCTTCCACAACTGGTCACTTCCCCTCCCCTTTATATGGATGCACATAAAGTGAACACGTATAGTGTTCTATTTTACAATCCTCAACCAGTGTTGCTATCCCCTCCGCCACTTTCTCAGCCTCAGCATACCCAAATGATTGATTCGCCTCCTCAAGATGCTTA 530 0.4132 MASLSEAPHMESFMSFPSGFKFCPTDQELIYFYLRKKVNNESLPTNPIREVNIYLYNPVDLLDEWVLCKIYERRKGLEDAKDNDQTQLSTLSQYLLHPLHQLLPQVPSELPQKPQQTPPPPSHLPQLVTSPPLYMDAHKVNTYSVLFYNPQPVLLSPPPLSQPQHTQMIDSPPQDA 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00020 176 MobiDBLite consensus disorder prediction 157 176 - -
Bva07g00020 176 SUPERFAMILY NAC domain 9 65 IPR036093 GO:0003677|GO:0006355
Bva07g00020 176 MobiDBLite consensus disorder prediction 160 176 - -
Bva07g00020 176 MobiDBLite consensus disorder prediction 108 129 - -
Bva07g00020 176 PANTHER NAC DOMAIN-CONTAINING PROTEIN 102-LIKE 8 61 - -
Bva07g00020 176 PANTHER NAC TRANSCRIPTION FACTOR 56 8 61 - -
Bva07g00020 176 Gene3D NAC domain 25 64 IPR036093 GO:0003677|GO:0006355
Bva07g00020 176 MobiDBLite consensus disorder prediction 111 127 - -
Bva07g00020 176 Pfam No apical meristem (NAM) protein 17 64 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00020 Bva-Chr7 793939 795356 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00020 10 70 NAC Transcription Factor Family AT1G62700 45.902 3.12e-11 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva07g00020 NAM 7.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00020 - - ming:122093525 70.4774