Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00005 ATGAGAATTACTAACTCCTCCACCGATGAATCTGCACTTCTTGCTTTAAAAGCCTCACTCAATTTAAACCCCGATCATGTTTTATCTATCAATTGGTCTAGCTCTTTCTCCTTCTGTAACTGGATTGGTGTTACTTGTGGTATCCATCATAGAAGAGTGAGAGTCTTGAATCTCAGTGACATGGGGCTTAGTGGCATCATACCTCCACAACTGGGaaatctttctttccttgttgAACTTGATCTTCGCAACAATAGCTTTCATGGTCGGTTGCCACGGGATTTACTCCAATTGCATCGGCTAAAGCTAGTCAACTTGAGCTGTAATAGCTTAAGTGGAGAAATTCCCAACGGGATAGGCAGCTTATCTATGCTGCAGCACTTGAGCTTCCGATACAACAATTTCAGTAGTGTTATTCCCGCGTCTATATCCAACTTGTCAATGCTGCAGACCTTGGATCTTAGCAACAATCTCATCATTGGAAGCATTCCTTCTGAGATTGATCAACTTCGCAATTTGAAGTTTTTACGTATCGCATGCAATATGCTTACGGGAACCATACCTCCAACAATTTCCAACATGTCTTCACTTGAAATATTGAGTTTATCTCTAAATTCATTATCAGGAAACCTTCCAAAAGGAATCGGGGATCTTCAGCAACTAATAGTGATCTATATTCATCATAATCAGTTGTCGGGAAACATTCCAAAGGAGATTGCTGAAGGACATAGCATAACACATACCTCAACATTGGCTACAACAGAGTATGGATCAGAGGGAATTATTTCTGTTAAAGGAGATGTGTATAGCTATGGGATTATGTTGATGGAAATGTtcacaagaaagaaaccaaCAGATGAGATGTTTGAAGATGTATCCAGCTTGAAAAGTTGGGTTAGTGAATCAATGCCCCATGCAATAATACATGTTGTTGATTCTACTTTGCTGCAGCTAGAGGGGCAACAAATTGACAATATAATGGCACATGCATCATCTATTCTAAAGTTAGCCTTGAATTGTTGCGAAAATTTGCCTGAATCACGGATCAATATGCTGGATGTTGTTGCTTCATTGAAGAAAGTCAGGATTCGGTTCATGCAAAATGCAAGGGCgacatg 1118 0.3846 MRITNSSTDESALLALKASLNLNPDHVLSINWSSSFSFCNWIGVTCGIHHRRVRVLNLSDMGLSGIIPPQLGNLSFLVELDLRNNSFHGRLPRDLLQLHRLKLVNLSCNSLSGEIPNGIGSLSMLQHLSFRYNNFSSVIPASISNLSMLQTLDLSNNLIIGSIPSEIDQLRNLKFLRIACNMLTGTIPPTISNMSSLEILSLSLNSLSGNLPKGIGDLQQLIVIYIHHNQLSGNIPKEIAEGHSITHTSTLATTEYGSEGIISVKGDVYSYGIMLMEMFTRKKPTDEMFEDVSSLKSWVSESMPHAIIHVVDSTLLQLEGQQIDNIMAHASSILKLALNCCENLPESRINMLDVVASLKKVRIRFMQNARAT 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00005 372 SUPERFAMILY Protein kinase-like (PK-like) 255 364 IPR011009 -
Bva07g00005 372 Gene3D Ribonuclease Inhibitor 8 120 IPR032675 -
Bva07g00005 372 Pfam Leucine rich repeat N-terminal domain 7 46 IPR013210 -
Bva07g00005 372 ProSiteProfiles Leucine-rich repeat profile. 148 170 IPR001611 GO:0005515
Bva07g00005 372 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 123 - -
Bva07g00005 372 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 239 368 - -
Bva07g00005 372 SUPERFAMILY L domain-like 8 236 - -
Bva07g00005 372 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 121 242 - -
Bva07g00005 372 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 239 368 - -
Bva07g00005 372 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 2 123 - -
Bva07g00005 372 SMART LRR_typ_2 146 170 IPR003591 -
Bva07g00005 372 SMART LRR_typ_2 194 218 IPR003591 -
Bva07g00005 372 SMART LRR_typ_2 122 145 IPR003591 -
Bva07g00005 372 SMART LRR_typ_2 74 98 IPR003591 -
Bva07g00005 372 Gene3D Ribonuclease Inhibitor 121 192 IPR032675 -
Bva07g00005 372 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 121 242 - -
Bva07g00005 372 Pfam Leucine rich repeat 171 231 IPR001611 GO:0005515
Bva07g00005 372 Pfam Leucine rich repeat 100 159 IPR001611 GO:0005515
Bva07g00005 372 Gene3D Transferase(Phosphotransferase) domain 1 218 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00005 Bva-Chr7 531178 541311 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00005 245 366 Receptor kinase-like Gene Family AT5G20480 32.787 1.51e-12 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva07g00005 PK_Tyr_Ser-Thr 3.6e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00005 - K13420 ahf:112722956 275.789