Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03324 ATGGAGGATAAATTGCCCAAGATGGAAACCTTTATTCAGCGGGAATTGCCAAATTGTTTTCAAGAAATGTCAATGGGATCAGAGTTCTCAAATGATCCAATTAATAAGGATTTCCAGATTCTCACTCCTCATCAAGCTTATGTGTTAAAAAGTGAGGTGAATTCATCAACATCGTCATTTGGAATGCTTTTTCCATGTTCTAAGTCTAGTTCAACAGCTGAAGAAGCACCTGGGGCCACTTCGATGAGTGACATCCCTGCTAGATTCTCAGATCAAAAGGATATCATCAAAGGGTATCCTAAAAGTGAATCTCTTACGTCATTCAATTATGTTTCATCTCCTGTTGCTTCAACCTCAGATTCCAAGACAAGCTTCATTCCTTTAAATCTGTTGGAAACACTGCCAGCATTAACAAGGGCACAAGGTTCCGATGAGCCGGCTTCTCCGGCatcaaattttccaaatttgagTTTGTTCTTGCAGGAGCCTCCCATGTTGCCTTCATCATCAAAGATTACAGATGATTCATCGCTACTCAAgaccaaaaattttgaagctcACTCAGCAACATCAGACCCTTCATTTCTTGTTTCACAATTTCAGCATCAATCAGCTACAGATACTCCCAAAATGAACAAGAATCCAACAAATCAcaagaccaaatctctctatgaCCATAACTGGTTGAGCACCACAAGAACTCAGCCAACAAAGTATGCAGGAAGAGGCAAGCTGTTTAAAGGGGTCAGACAAAGGCATTGGGGCAAATGGGTTGCAGAGATTAGATTACCAAGGAATAGAACGAGAGTTTGGTTGGGGACTTTCGACACAGCTAAAGATGCCGCCATTGCTTATGATACAGCAGCATATCTACTTCGAGGAGAGTGTGCTCAACTGAATTTTCCAGATCTTAAGCATCAAATTATGGACAATTCATTAGCTGGAACTACTGCTGCACTTCTTGAGGCAAAGTTAGAAGCGATATCACGGAAAGGTACAGAATCACCGCCAGGGTCACCgaataaacacaaaaatgaGAATGCCAAATTGAGAAGTGTGAATCAGAATTCAACAAGGAAAGAATGGCAGTTTGAGATAGAGAGAAGAGTTGGAGCTGACAAAGTTGAAAGAAGCAACGGTACACATCAAGAGGTGTCAGATGTCGAAGCTGTTCAATTAAGTAGAATGCCCTCTTTAGATATGGATCTCATATGGGATGCTCTTCTGGTCTCGGATTCATG 1241 0.3924 MEDKLPKMETFIQRELPNCFQEMSMGSEFSNDPINKDFQILTPHQAYVLKSEVNSSTSSFGMLFPCSKSSSTAEEAPGATSMSDIPARFSDQKDIIKGYPKSESLTSFNYVSSPVASTSDSKTSFIPLNLLETLPALTRAQGSDEPASPASNFPNLSLFLQEPPMLPSSSKITDDSSLLKTKNFEAHSATSDPSFLVSQFQHQSATDTPKMNKNPTNHKTKSLYDHNWLSTTRTQPTKYAGRGKLFKGVRQRHWGKWVAEIRLPRNRTRVWLGTFDTAKDAAIAYDTAAYLLRGECAQLNFPDLKHQIMDNSLAGTTAALLEAKLEAISRKGTESPPGSPNKHKNENAKLRSVNQNSTRKEWQFEIERRVGADKVERSNGTHQEVSDVEAVQLSRMPSLDMDLIWDALLVSDS 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03324 413 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF062 9 412 - -
Bva06g03324 413 SMART rav1_2 245 308 IPR001471 GO:0003700|GO:0006355
Bva06g03324 413 CDD AP2 244 304 IPR001471 GO:0003700|GO:0006355
Bva06g03324 413 Gene3D AP2/ERF domain 245 303 IPR036955 GO:0003700|GO:0006355
Bva06g03324 413 ProSiteProfiles AP2/ERF domain profile. 245 302 IPR001471 GO:0003700|GO:0006355
Bva06g03324 413 SUPERFAMILY DNA-binding domain 245 303 IPR016177 GO:0003677
Bva06g03324 413 MobiDBLite consensus disorder prediction 330 357 - -
Bva06g03324 413 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 9 412 - -
Bva06g03324 413 PRINTS Ethylene responsive element binding protein signature 246 257 IPR001471 GO:0003700|GO:0006355
Bva06g03324 413 PRINTS Ethylene responsive element binding protein signature 268 284 IPR001471 GO:0003700|GO:0006355
Bva06g03324 413 MobiDBLite consensus disorder prediction 200 222 - -
Bva06g03324 413 Pfam AP2 domain 246 294 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03324 Bva-Chr6 22703327 22704568 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g03324 113 408 AP2-EREBP Transcription Factor Family AT4G13620 44.051 5.64e-66 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva06g03324 AP2 4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03324 - - gmx:100820013 390.963