Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03310 ATGTCCAACAACAATGAAACTGCTCCAAATTGCGCCCCCATGACCGTTGATTCAGCTGCTAATTCTGCTGATGAATCCAGCATTCTGAATCGGGGGCCTAGGCCGATGGGTCCATCTATAGGGCATAACCCTAGAGGGAGAAGTGCAAAGGAGAAAACGGTCGTTGATCACAGGCAGGGCAATGGTGTTTCTTCAATGCTGTCATCTGAGGCTGCTTCTCAAATGGTGATTTATGAAACGAAAAGGTTCATATCCCATGATAAGCTCGCTGAAATTTCTCTCACTGATCCCAAAAGAGCTAAGAGGATCCTTGATAACAGGAAATCTGCTGCTCGATCAAAGGAGAGACAGATTTGTTACACTAATGAGCTGGTAAAGAAGGTGAAGGCACTCGAGGCTGAAGAAACTAGCTTCTCTATCCAGCTTTCAATGCTTCAGATGGACACTTATCGTTTGACAGCTGAGAATGAGGACCTGAAAACACGCCTAGAGGCTATGGAAAAAGAAGCAGAGCTGAGAGATGTTGTGAGAAGGGACATGGTTGCACTGCGGTCTTTTCTTGCTGcattcttccattttgattA 584 0.4452 MSNNNETAPNCAPMTVDSAANSADESSILNRGPRPMGPSIGHNPRGRSAKEKTVVDHRQGNGVSSMLSSEAASQMVIYETKRFISHDKLAEISLTDPKRAKRILDNRKSAARSKERQICYTNELVKKVKALEAEETSFSIQLSMLQMDTYRLTAENEDLKTRLEAMEKEAELRDVVRRDMVALRSFLAAFFHFD 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03310 194 CDD bZIP_plant_RF2 99 148 IPR044759 GO:0003700|GO:0006355
Bva06g03310 194 SUPERFAMILY Leucine zipper domain 98 152 IPR046347 GO:0003700|GO:0006355
Bva06g03310 194 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 46 175 - -
Bva06g03310 194 Pfam bZIP transcription factor 98 147 IPR004827 GO:0003700|GO:0006355
Bva06g03310 194 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 96 159 IPR004827 GO:0003700|GO:0006355
Bva06g03310 194 Gene3D - 97 172 - -
Bva06g03310 194 SMART brlzneu 94 158 IPR004827 GO:0003700|GO:0006355
Bva06g03310 194 Coils Coil 149 169 - -
Bva06g03310 194 MobiDBLite consensus disorder prediction 1 28 - -
Bva06g03310 194 MobiDBLite consensus disorder prediction 1 55 - -
Bva06g03310 194 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 46 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03310 Bva-Chr6 22213055 22217707 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g03310 84 176 bZIP Transcription Factor Family AT1G43700 58.065 1.84e-29 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva06g03310 bZIP_1 1e-06 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03310 K20557 - jre:109011801 139.428