Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03304 ATGGGTTCAACAAATATCAGAGACATCTTGACATCGTTTAGTCCTTCTTTGGACTTGTTTGCTATCAGCACTGGAGATGGTCGAGTAAAGATATGGGATACACTGAAGGGTCAAGTCCAGACTGAGTTTGCCGACATTACATCTACTGATGCAACAACTATATATGATAGATCCTTAAAGGGACATCTTTCAATGGATTATACATGCATGAAGTGGTTGTCTTTGGAAAGAAAGaaaaaaaggaagcatAGGTCCTCTTTTTTGGTACTTGGGACAGGTAGTGGTGATGTATTGGCGCTTGATGTGGCTGCCGGCCAGTTAAATTGGAGATTTAGTGACTGCCATCCTGGGGGTGTGAGAgccatttcttcttctgcaaATGGATCTTGTGTTTATACTGCAGGTGCAGATGGGATGGTATGCAGGATTGATTCATTGTCAGGAAATcttttggagaagtttaaagCTTCTACAAAAGCAATATCCAGTATATCTATTTCTTCAGATGGGAAGACATTAGCTACTGCAGCAGCACAATTGAAGATTTTTAACTGTTCTGATAACAAGAAGATACAAAAATTCTCAGGTCATCCTggATTGGTTCGCTGTATGGTCTTCACTGAAGATGGGAAATATGTCCTTTCATCTGGTGTTGGTGAAAGGTATGTTGCATTTTGGAGGATAAATGGTGCCAAAAAGCAGTCAGCGAGTTGTGTTCTCTCCATGGAGCACCCTGCTGTGTTTCTTGATAGCAGATGTGTTGACAGTGGGGGTCCTGATGAGGCTGGTTTATGTGTTTTGGCTATCTCAGAAGTTGGTGTTTGTTATATTTGGTTTGGAAATGATATTGAGGAACTTCGTAATGCAAAACccacaaaaataacattatcttTGGAAGATGTATCCTTCAGAAATTACAAGGGGGCACTGCCAGCAATATATGCTGCAAAATTGCAAGGCACTGAAAAACCTGCCACTGGGAaagtttttcttgtttatggGTTGCTTGTAAAACCATCATTTCAACAAATTCTAGTTCATTCTGGCACAGACATAAAGTTGAATATTTCCCATGATGGTATTCTTCTTCCAATGAGTCAGTCTCTTATCAAGTCTAAGAAGGGGGCAAATGCAAAAAAACTTACTGCACTAGACCGTGCTAATGCAGAGGATGCCCTACTCCCAAATCCTAAGGTTTTTGATTCTCTGGAGAAACAGGAAGCATTTCAAAACTCTTTGGATGCAATTGTGGTAGTAGATGATTCTGTAAGAAGTTGCAAAGCTGAGTCTACTGAGGATGAAGAGATGGTCCTAGAcgagactgatgtaatatgcatTGAGGACAGGCTGAAATCACTGGGAATACTTAACAGTGAAAATGATCTTGTATCAAATGTCAAACTTCATTCTACATTGTTGAAGGGTATTGATCTTGATGCTGCTGTTCCAATGAAAAAGATAAGAGCAACTATTTTGTCTATGGTGCCTAGTGAAGCATACAAGCTACTGGAAGTCTTGGTGGCTGCATGGCAATCAAGGTCATGTAATGGAAAGAATGCTCTTCCATGGATACATAGCATATTAGCGAGTCATGGTCACTATGTCATGTGTCAGGAATCTGTTACTCATATGCTTGATTGCTTATCCAAGATTTGCAATTCCAGAGGAGCTGCTGTTCAACCATTGTTACAGTTGTCGGGTCGTCTACAGCTGGTGACAACACAGATTAACAAGGCTTCTCAGAATAAAAGTCATTCAGTGATAGTGAATGATCACCAAATGGAAGGAAGTGAAGATGAGGATGAAGATTTGCACGAGGAAGGAGATGATGCATCTGGAATAAGtagtgatgatgatgaaagctA 1865 0.3791 MGSTNIRDILTSFSPSLDLFAISTGDGRVKIWDTLKGQVQTEFADITSTDATTIYDRSLKGHLSMDYTCMKWLSLERKKKRKHRSSFLVLGTGSGDVLALDVAAGQLNWRFSDCHPGGVRAISSSANGSCVYTAGADGMVCRIDSLSGNLLEKFKASTKAISSISISSDGKTLATAAAQLKIFNCSDNKKIQKFSGHPGLVRCMVFTEDGKYVLSSGVGERYVAFWRINGAKKQSASCVLSMEHPAVFLDSRCVDSGGPDEAGLCVLAISEVGVCYIWFGNDIEELRNAKPTKITLSLEDVSFRNYKGALPAIYAAKLQGTEKPATGKVFLVYGLLVKPSFQQILVHSGTDIKLNISHDGILLPMSQSLIKSKKGANAKKLTALDRANAEDALLPNPKVFDSLEKQEAFQNSLDAIVVVDDSVRSCKAESTEDEEMVLDETDVICIEDRLKSLGILNSENDLVSNVKLHSTLLKGIDLDAAVPMKKIRATILSMVPSEAYKLLEVLVAAWQSRSCNGKNALPWIHSILASHGHYVMCQESVTHMLDCLSKICNSRGAAVQPLLQLSGRLQLVTTQINKASQNKSHSVIVNDHQMEGSEDEDEDLHEEGDDASGISSDDDES 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03304 621 MobiDBLite consensus disorder prediction 582 621 - -
Bva06g03304 621 ProSiteProfiles Trp-Asp (WD) repeats profile. 12 42 IPR001680 GO:0005515
Bva06g03304 621 Gene3D - 10 305 IPR015943 GO:0005515
Bva06g03304 621 MobiDBLite consensus disorder prediction 595 621 - -
Bva06g03304 621 PANTHER OS03G0300300 PROTEIN 1 620 - -
Bva06g03304 621 PANTHER OS03G0300300 PROTEIN 1 620 - -
Bva06g03304 621 Pfam Dip2/Utp12 Family 481 573 IPR007148 -
Bva06g03304 621 Pfam WD domain, G-beta repeat 9 33 IPR001680 GO:0005515
Bva06g03304 621 Pfam WD domain, G-beta repeat 189 226 IPR001680 GO:0005515
Bva06g03304 621 SMART WD40_4 2 33 IPR001680 GO:0005515
Bva06g03304 621 SMART WD40_4 104 144 IPR001680 GO:0005515
Bva06g03304 621 SMART WD40_4 187 227 IPR001680 GO:0005515
Bva06g03304 621 SMART WD40_4 147 184 IPR001680 GO:0005515
Bva06g03304 621 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 12 237 IPR011047 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g03304 115 226 U-box Gene Family AT2G33340 27.586 2.33e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03304 K14546 - gmx:100784148 833.172