Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03303 atggCACTGGTGTTGAGTGCCAGTGATGCAGGTCGAATTGGTCATCTAGTTCTCCCAAAAGCATGTGCAGAAGCTTATTTCCCTCCTATTTCTCAATTAGAAGGTCTTCCTTTGCAAATTCAAGATGGGGAGGGGAATGAATGGACGTTTCAATTCATATTTTGGCCTAATAACAACAGTAGGATGTATGTCTTGGAGGGTTTGACCCCTTGCATACAATCCATGGAATTACAAGCTGGTGATACTGTGCAAGCTTTAATGGGCATAAAAGAATCTTTGGTGGATCCTCATGGTGTTTTAGAaaattgggatggggatgctGTTGATCCGTGTAGCTGGAATATGGTTACCTGTTATCTTAAGAACCTTGTCATTGGCCTGTACACAAgccaagagaagcaaaatgaaagaattctgcattctgccaatgggcgccgtggcgcccatgCCTTGGCGTTGTGGCACCGTGTACCAAAGAGCAAAGTGTGCATTCTACCAGTGGGCGTCGTGACGCCCAGACTTGGTGTCGTGGCGCCTAGGATCTGTCTCGGAGCAGTTTG 560 0.3893 MALVLSASDAGRIGHLVLPKACAEAYFPPISQLEGLPLQIQDGEGNEWTFQFIFWPNNNSRMYVLEGLTPCIQSMELQAGDTVQALMGIKESLVDPHGVLENWDGDAVDPCSWNMVTCYLKNLVIGLYTSQEKQNERILHSANGRRGAHALALWHRVPKSKVCILPVGVVTPRLGVVAPRICLGAV 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03303 186 Gene3D - 1 97 IPR015300 -
Bva06g03303 186 CDD B3_DNA 4 83 IPR003340 GO:0003677
Bva06g03303 186 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 4 83 - -
Bva06g03303 186 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 4 83 - -
Bva06g03303 186 Pfam B3 DNA binding domain 4 83 IPR003340 GO:0003677
Bva06g03303 186 Pfam Leucine rich repeat N-terminal domain 83 118 IPR013210 -
Bva06g03303 186 SUPERFAMILY DNA-binding pseudobarrel domain 3 83 IPR015300 -
Bva06g03303 186 SMART B3_2 1 100 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03303 Bva-Chr6 22082890 22084768 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g03303 4 100 B3 DNA Binding Superfamily AT2G30470 76.289 3.45e-43 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bva06g03303 B3 7.7e-11 CL0405