Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03290 ATGGGGACGGAGCAATTGATGTCCGGTGGCGGACCCCGTTATGTTCAAATGCAGTCGGAGCCGTCGACGGCGACGGCGGCGACGATGCTCTCTACCTTCTCATCATCGTTCCGCGAACCGGCTCGGATATTCGATGAGTTGCCTAAAGCCATCATAATTTCCGTGTCTCGCCCCGACGCCGGTGATATCAGTCCTATGCTTCTTTCTTACACAATCGAGTTACAGTATAAACAGTTCAAGTGGCAGTTATTGAAGAAAGCTTCACAAGtgttttatttgcattttgcATTGAAGAAACGTGCCTTTATTGAAGAAATTCATGAGAAGCAGGAGCAGgTTAAAGAATGGCTTCAAAATCTAGGAATTGGAGAAAACACAGCTATGGTGCATGATGATGACGAAGCAGATGATGAAACTGTTCCTCTGCATCAGGATGAAAGTGCTAGAGACAGAGACGTTCCATCTAGCGCTGCTCTTCCAATTATACGGCCAGCCTTGGGACGACAGCAGTCAATATCGGATAGAGCAAAAATTGCAATGCAAGGGTATCTGAACCACTTTTTGGGGAATATCAGTATTGTAAACTCTCGAGAGGTTTGTAAGTTTTTGGAGGTCTCAAGATTATCTTTCTCACCTGAATATGGCCCAAAGCTGAAAGAAGATTATGTGATGGTGAAGCATCTGCCCAAAATTTTAAGGGATGATGATTCCAGAAAATGTTGCTTATCTAATTGTTTCAGTTGTTGTAATGACAATTGGCAAAAGGTTTGGGCTGTACTAAAACCTGGATTCTTGGCATTGTTGGCAGATCCTTTTGATGCCCAACCTTTGGACATTGTTGTCTTTGATGTACTACCTGCCTCAGATGGGAATGGGGAGGGTCGTCTATCCTTAGCAAAGGAAATGAAGGAACGAAATCCTTTACGCCATTCATTCAGGGTGACTTGTGGAACCCGGAGCATTAGGATAAGATCAAAAAGCAGTGCGAAAGTTAAAGATTGGGTTGCTGCAATTAATGATGCTGGACTCAGACCTCCTGAAGGCTGGTGTCATCCTCATCGCTATGGTTCCTTCGCTCCTCCAAGGGGCTTGACTGAAGATGATAGTCAGGCTCAGTGGTTTGTAGATGGTCGAGCAGCATTTGAGGCCATTGCTTTGTCAATTGAGGATGCAAAATCGGAGatatttatttgtgggtGGTGGCTATGCCCAGAATTGTATCTTCGGCGTCCTTTTAATGCCCACGCTTCATCAAGGCTAGATAATTTGCTGGAAGCAAAAGCTAAGCAGGGGGTTCAGATTTACATTCTTCTTTACAAAGAGGTGGCTCTTGCTTTAAAAATCAACAGTGTTTATAGCAAGAGAAAGCTTCTTAGCATTCATGAGAATGTGAGGGTATTGCGTTACCCTGATCACTTTTCAAGTGGAGTTTACCTATGGTCTCACCATGAAAAACTTGTCATTGTTGATCATCAAATTTGCTTCATTGGAGGGCTGGATTTATGCTTTGGTCGTTATGACACATCTGAACACAAAGTGGGAGATTCCCCCTCTCTGATCTGGCCCGGAAAGGACTACTACAATCCAAGGGAATCTGAACCAAATTCTTGGGAAGATACAACGAAAGATGAATTGGATCGAGAAAGATACCCTCGAATGCCTTGGCATGATGTTCACTGTGCCCTTTGGGGACCACCTTGTCGTGACATTGCTAGGCACTTTGTTCAGCGATGGAATTATGccaagAGGAACAAAGCTCCAAATGAGCAAGCAATACCATTACTTATACCTCAGCATCATATGGTCATTCCACACTACTTGGGAAGAAGTAAAGAGATGAACATTGAAAATAACAACCACAACAATCATAGGGGTATGAAAAGGGAAGATTCCTTTTCCTCATCTGCCCAAGATATTCCTCTACTTTTGCCTCAGGAATCTGAAGGGATGGATACTCCTAAAGGagaccaaaaattaaatgggTTAAACCTTGATCAGCCAATCAGGGTCAGCGGTGGTCTTCCTTTCCCATTCCGGAAGGCCAAAATTGAACCAGTAGGTTCAGATACACCAATGAAGGGCTTTGTAGATGATCTTGACAGTGTGGATTATCGTGGAAAATTGTCTCTAGATAAAGTGGCTGAGCCTGGCTTAAGAAATACTGATTCAGAATGGTGGGAAACACAAGAACGAGGTGATCAGAGGGATTTTGCAGATGAATCTGGACAAGTTGGTCCTCGTGTTTCCTGCCGCTGTCAGGTTATTAGGAGCGTCAGCCAATGGTCTGCTGGAACAAGCCAAATCGAAGAGAGTATCCACAATGCTTATTGCTCTCTCATTGAGAAAGCAGAAAACTTTATCTACATTGAGaatcaattttttatctcaGGCCTTTCTGGGGATGAGATGATACGGAATCGTGTGTTAGAAGCTTTATATCGAAGGGTCATGCGAGCTTACAATGATAAAAGACCTTTTAGAGTCATAATTGTCATACCACTCTTGCCAGGCTTCCAGGGGGGCCTGGATGATAGTGGTGCAGCATCTGTAAGAGCCATAATGCATTGGCAGTACCGAACCATTTGCAGAGGACAGAATTCTATATTACATAATCTGTATGATCTTCTTGGTCAAAAAACGCATGATTACATATCTTTCTATGGCCTCAGATCATATGGTAGACTATTTGATGGTGGTCCGGTGGCAACCAGCCAGGTGTACGTTCACAGTAAAATCATGATAGTTGATGACTGTACAACTTTGATTGGATCTGCTAATATTAATGATAGGAGTTTACTTGGTTCCAGAGATTCTGAGATTGGTGTAGTTATAGAAGACAAAGAATTTATTGGATCATATATGGGGGGGAAACGTTGGAATGCTGGAAAgttctctctgtctctccGATTGTCATTATGGTCCGAACACTTAGGTCTCCGACCAGGAGAGATCAATCAAATAATGGACCCAGTTATTGATTCTACTTACAAGGATATTTGGATGGCAACAGCAAAgACAAATACTACAATTTACCAGGATGTCTTTTCTTGCGTACCTAGTGATCTGGTACACAGCAGACTCGCTTTCAGACAAAGCATGGCTttctggaaagaaaaaattggacACACTACCATTGATTTAGGAATAGCTCCTGAGAAGTTAGAATCCTATCACAATGGAAATGTCAAGAACACTCATCCAATGTCGAGATTATCATCAGTGAAGGGTCACctagtttcttttcccttgGAATTCATGTGTCAAGAAAATCTAAGACCTGCTTTTAATGAGAGCGAGTACTATGCATCTCAAGTTTTCCATTG 3323 0.4132 MGTEQLMSGGGPRYVQMQSEPSTATAATMLSTFSSSFREPARIFDELPKAIIISVSRPDAGDISPMLLSYTIELQYKQFKWQLLKKASQVFYLHFALKKRAFIEEIHEKQEQVKEWLQNLGIGENTAMVHDDDEADDETVPLHQDESARDRDVPSSAALPIIRPALGRQQSISDRAKIAMQGYLNHFLGNISIVNSREVCKFLEVSRLSFSPEYGPKLKEDYVMVKHLPKILRDDDSRKCCLSNCFSCCNDNWQKVWAVLKPGFLALLADPFDAQPLDIVVFDVLPASDGNGEGRLSLAKEMKERNPLRHSFRVTCGTRSIRIRSKSSAKVKDWVAAINDAGLRPPEGWCHPHRYGSFAPPRGLTEDDSQAQWFVDGRAAFEAIALSIEDAKSEIFICGWWLCPELYLRRPFNAHASSRLDNLLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDHQICFIGGLDLCFGRYDTSEHKVGDSPSLIWPGKDYYNPRESEPNSWEDTTKDELDRERYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPNEQAIPLLIPQHHMVIPHYLGRSKEMNIENNNHNNHRGMKREDSFSSSAQDIPLLLPQESEGMDTPKGDQKLNGLNLDQPIRVSGGLPFPFRKAKIEPVGSDTPMKGFVDDLDSVDYRGKLSLDKVAEPGLRNTDSEWWETQERGDQRDFADESGQVGPRVSCRCQVIRSVSQWSAGTSQIEESIHNAYCSLIEKAENFIYIENQFFISGLSGDEMIRNRVLEALYRRVMRAYNDKRPFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLYDLLGQKTHDYISFYGLRSYGRLFDGGPVATSQVYVHSKIMIVDDCTTLIGSANINDRSLLGSRDSEIGVVIEDKEFIGSYMGGKRWNAGKFSLSLRLSLWSEHLGLRPGEINQIMDPVIDSTYKDIWMATAKTNTTIYQDVFSCVPSDLVHSRLAFRQSMAFWKEKIGHTTIDLGIAPEKLESYHNGNVKNTHPMSRLSSVKGHLVSFPLEFMCQENLRPAFNESEYYASQVFH 1107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03290 1107 PANTHER PHOSPHOLIPASE 38 1104 - -
Bva06g03290 1107 SUPERFAMILY PH domain-like 249 341 - -
Bva06g03290 1107 SMART PH_update 217 345 IPR001849 -
Bva06g03290 1107 Gene3D Endonuclease Chain A 362 604 - -
Bva06g03290 1107 PANTHER PHOSPHOLIPASE D 38 1104 IPR015679 -
Bva06g03290 1107 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 478 505 IPR001736 GO:0003824
Bva06g03290 1107 SUPERFAMILY Phospholipase D/nuclease 331 597 - -
Bva06g03290 1107 Coils Coil 99 119 - -
Bva06g03290 1107 SMART pld_4 478 505 IPR001736 GO:0003824
Bva06g03290 1107 SMART pld_4 904 931 IPR001736 GO:0003824
Bva06g03290 1107 CDD PLDc_vPLD1_2_yPLD_like_1 371 515 - -
Bva06g03290 1107 Pfam Phospholipase D Active site motif 478 505 IPR001736 GO:0003824
Bva06g03290 1107 Gene3D - 246 343 IPR011993 -
Bva06g03290 1107 Gene3D Endonuclease Chain A 710 963 - -
Bva06g03290 1107 PIRSF PLD_euk 16 627 IPR016555 GO:0004630|GO:0006654|GO:0048017
Bva06g03290 1107 PIRSF PLD_euk 605 1107 IPR016555 GO:0004630|GO:0006654|GO:0048017
Bva06g03290 1107 CDD PLDc_vPLD1_2_yPLD_like_2 764 948 - -
Bva06g03290 1107 Pfam PLD-like domain 779 950 IPR025202 -
Bva06g03290 1107 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 904 931 IPR001736 GO:0003824
Bva06g03290 1107 CDD PH_PLD 194 341 - -
Bva06g03290 1107 ProSiteProfiles PH domain profile. 252 343 IPR001849 -
Bva06g03290 1107 SUPERFAMILY Phospholipase D/nuclease 725 980 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03290 Bva-Chr6 21902924 21916114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g03290 1 988 Phospholipase D Gene Family (Wang group) AT3G16785 74.346 0.0 1446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03290 K01115 - gmx:100780514 1943.32