Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03215 ATGGCAGATATCTTAATATCTGCAGCAGCCAAGGTTGCTGAATACTTTGTTACTCCAGTGCTACGATCAGCAACACGTCATGCACGGTTTTTGTTTTGTGCTggcaaaatcaaaagaaatcttgAGTCCGTGAAGGCAGAGTTGATATCAAAGCAAGCAAGTgtgaagaagcagaagcatGAAGCACTTATTAGAActgaaattattgaagaagCTGTTGAGAAGTGGTTGAATGAAGTGGCAAGTGTACTGGAAGAGGTGGAGAAGCTGGAAGAGGAAATgaaggaaggcagcagctgTTGTTGGGGATGGTGTTCCACTTTAAAGGGATATCATCTTTGCAAACAATTTGCAAAGATAACTGAGACAATGAAAAGTCAGAGTCAAAGGGGGGAATTCAATCCATTTTCTCGTCCTGCTCCGATTCCAGACATTGAGTTCTTTTCCTCTGGAAATTTTGTGTGTTTTGAGTCCACAAAGTCGGCTTCTAATCAACTTTTGGAGGCATTGCGAGATGATAGCGTCCGCATGATTGGATTGCATGGCATGGGGGGATGCGGCAAGACAACCCTGGCAAAAGAAGTGGGCAAGGAAGCcaagaaattgaaactttttgaCCATGTTTTATTTACTGTAGTTTCCCGGCTTGTAAATGTCAAAAAGATTCAAGATGAAATTGCAGGGTTGTTGgagttaaattttgaaaatgaccCAGACAATGTAAGAGCAAGAAAGCTATCGTTGCGACtacaaaatgggaaaaaacatcttataatattagatGATGTAtggtcaagtttgaatttGGCAGAAGAAGTCGGAATTCCTCTGAACAACAATTGTAAGGGCTGCAAGGTTCTCTTAACTACACGCCTCCAACAAGTGTGTGCTCGTATGGACTGTGAAAAGAAGATTCAACTGGATCTCTTATCTTATGAGGAAGCTAACCATTTGTTCCAAAGGAACACCCGTATAGTTGATGAATTTGTGGCACAAGAAATTGTGAAGGAATGTAAAGGACTTCCCATTGCAATTGTAGCAGTGGCAAAATCTTTGAAGGGTAGATCGCTTGATTGGTGGAAAGTAGCATTAGACAAGCTGAGAACTTCAAAACCAATTGatgtggaagaaaatgagaaagatgCTTACTCTTGTCTTGAATTGAGCTACAATTCTTTACGAAGGAATGAAGCCAGGTTGCTGTTAAAAATCTGTTGTATGTTTTCAGAAGATTATAAAATTCCTCTTGAAGAGTTATTTAGATATGGAATAGGGTTGGGTATGTGTGAGGGAGAGGACTCATTTGATTTAGCAAGGAGTACAGTGAATACTGTTGTAGAAGATCTCATAGATTCTTCATTGCTATTGCCTTGCCAGAATGAGAATTactggggaaaaaaatatttcaacataCATGACGTGGTCCGTGATGTGACTTTATGGATAACATCAAAAGAGCATAATACTATAACAGTAAATCCTGAAAGAGGTTTTAGTGCAATTGCAGATAATGGATCTTTAAAAGATTGTTATGCTGTATCTTTGTGGCACAAGGAAATAGATCAGTTTCCTCAGTGTTTAGATGCTCCAAAACTCCGGTTCCTATTGTTAAATTTACTCCGTGACCAGCATTTGGATATTTCTGATGCATCGTTTGAAGGCATGAAAGAGCTCAAGCTTATGTCACTAGTCAACGATAAACAATTTGAAGTCATGAAAGAGCTCAAGCGTTTTTCACTAGTCAACAATAAAGGATTTCCATTTAACAACCACGCCATTTTGTCATTACCGTCATCAACCCAGTGGAAGTGTTTCAATAATCTTCACACTCTGCGTTTGGTACGACAAAAGATTGGTGACATCTCTTTTGTAGCAAGCCTAAGAAGACTTAAGATTCTTGACTTGGCAGGTAGTATCTTCAAGAAACTGCCAAATGGGATTGCTGATATGAATTGTGAATTGAAATTGATGGATTTGTCATATTGCAAAattgaagaggaagaggacTGTTCTGAAGTCATTGGAAGATGCTCACAACTGCAAGAGTTATACATGCCTCTTGATATTGCACTACCTTACGAATGCTTTATGTGTGCTACCTTTCCGAAATTGCAAAGGTATcgtttgaatatttgctatcATAATTTCGAGCAGGAGAGCGAGTTTGACTTTGATTGGGCAGAATTTAGAGTTGTAAGCATTGGGAATATGTATATCTCCAACTTATGTCCAACTGTTGGGGAACTTTTAAAAAGAGCAAGCTCAGTTTGTGTTGATGGGCTTGTTGGAGGTTGCAAAAGTATCATTCCTGATTTTGTTTTAGCTTTTGGAGTAACGAATGAGTTGACTGGACTTTATCTGTACTCTTGTTCAGAGATAAAATGCGTCATTGATACAACGACTTTTGATAATGCAGATGCAAAGTTTCCCATGTTGGTCAAGTTAGTACTTCATAACATGGGCAATTTAAAAGAAGTAATTCGTGGTCCTCCACCTCTGCGTGGCGcctttgagaaattaaaatatttgtcgATTTTAGATTGTCCCAATTTGACGTCACTCTTCACCTACTCTGTTGCCCAATCTCTGCCGCAGCTTGAAATTCTGAAAATTAGGGATTGCGATAAATTGAAGCACATAATAGTAAAGGAGGAGAATGGAATTGATGCAGATGAAATGGAAATATTCCCAATCTG 2696 0.3546 MADILISAAAKVAEYFVTPVLRSATRHARFLFCAGKIKRNLESVKAELISKQASVKKQKHEALIRTEIIEEAVEKWLNEVASVLEEVEKLEEEMKEGSSCCWGWCSTLKGYHLCKQFAKITETMKSQSQRGEFNPFSRPAPIPDIEFFSSGNFVCFESTKSASNQLLEALRDDSVRMIGLHGMGGCGKTTLAKEVGKEAKKLKLFDHVLFTVVSRLVNVKKIQDEIAGLLELNFENDPDNVRARKLSLRLQNGKKHLIILDDVWSSLNLAEEVGIPLNNNCKGCKVLLTTRLQQVCARMDCEKKIQLDLLSYEEANHLFQRNTRIVDEFVAQEIVKECKGLPIAIVAVAKSLKGRSLDWWKVALDKLRTSKPIDVEENEKDAYSCLELSYNSLRRNEARLLLKICCMFSEDYKIPLEELFRYGIGLGMCEGEDSFDLARSTVNTVVEDLIDSSLLLPCQNENYWGKKYFNIHDVVRDVTLWITSKEHNTITVNPERGFSAIADNGSLKDCYAVSLWHKEIDQFPQCLDAPKLRFLLLNLLRDQHLDISDASFEGMKELKLMSLVNDKQFEVMKELKRFSLVNNKGFPFNNHAILSLPSSTQWKCFNNLHTLRLVRQKIGDISFVASLRRLKILDLAGSIFKKLPNGIADMNCELKLMDLSYCKIEEEEDCSEVIGRCSQLQELYMPLDIALPYECFMCATFPKLQRYRLNICYHNFEQESEFDFDWAEFRVVSIGNMYISNLCPTVGELLKRASSVCVDGLVGGCKSIIPDFVLAFGVTNELTGLYLYSCSEIKCVIDTTTFDNADAKFPMLVKLVLHNMGNLKEVIRGPPPLRGAFEKLKYLSILDCPNLTSLFTYSVAQSLPQLEILKIRDCDKLKHIIVKEENGIDADEMEIFPI 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03215 898 Coils Coil 73 93 - -
Bva06g03215 898 Pfam NB-ARC domain 164 391 IPR002182 GO:0043531
Bva06g03215 898 SUPERFAMILY L domain-like 537 881 - -
Bva06g03215 898 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 787 886 - -
Bva06g03215 898 CDD AAA 164 290 - -
Bva06g03215 898 PANTHER - 20 685 - -
Bva06g03215 898 Gene3D - 389 480 IPR036388 -
Bva06g03215 898 Gene3D - 147 306 IPR027417 -
Bva06g03215 898 Gene3D Ribonuclease Inhibitor 730 886 IPR032675 -
Bva06g03215 898 PRINTS Disease resistance protein signature 338 352 - -
Bva06g03215 898 PRINTS Disease resistance protein signature 250 264 - -
Bva06g03215 898 PRINTS Disease resistance protein signature 177 192 - -
Bva06g03215 898 PRINTS Disease resistance protein signature 861 877 - -
Bva06g03215 898 Gene3D Ribonuclease Inhibitor 483 690 IPR032675 -
Bva06g03215 898 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 401 IPR027417 -
Bva06g03215 898 Gene3D - 310 388 IPR042197 -
Bva06g03215 898 PANTHER - 787 886 - -
Bva06g03215 898 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 20 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03215 Bva-Chr6 20559273 20564398 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g03215 175 408 WRKY Transcription Factor Family AT5G45050 27.711 1.53e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03215 - - lang:109341976 631.328