Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03184 ATGGACAAAGATTTGGCAATTTACGAATCAGTACCTGATGAATTCAAGAACTCGGATGGTTCCGCCAAGAAGGAATACATAGAGAAGGTGATTGTAGAAGGATACAAATTCGAACCCACAGATGAAGAGTTATTAGCTTTctacttgaaaaagaaagtcaaTGGTGAAGAATTGCCATTTCATGTAATTCATGAAGATAATGTCTACGATTATTCTCCTGAGGAACTCACAGGGAAGTATGAATTATACAAAACAACTACAGAATGGTACTTTTTTACTAAAAGGACAGCCAAGTACTTAAATGGAAAGCGACCAGATAGAACAGCTGGGACAACTGGTTACTGGAAAGCTAATGGGGTTGATAGGAAGATCAGAGTTAAAGGAGAAATAATTGGTTCCAAAAGGTGCTTGGACTTTTTTTATGGGCTAGACCGtaaaaattccaaaagaaCAAATTGGAAAATGCATGAGTATGTTCTTGCGAAGAAGAACATTCCTCCTAGCTGCAAAAGGACCAGAGATGGCAAGAAGttGTTGGACGAATACGTTCTCTGCTGTATCTACAAGCACGACAAGAGGAGGAATCATCAAAGTGACGACAATGACGAAGAACCTGAAGATCACAATGGACACCAACAGATTCTTGGTTCAACTTTGCTACCTCAAGGTAATGATGCACTGATGGCCACTGACATTAATAGACCAGAATCTTCAAATCAAGGGTCATATTTCTATGATAATACAACTACAACCTTGAAATTCAGTAACGCAGAAACTGGTCTCATTCACAACTATGAAAACAGCTCCTCCTTCATAGTTATGCATCCAACTGGTCTAGGGTTTCTGACTTCAAATATTGCAGAAGTAGTAGATCCAAGTGCTAATGTTATGGACAAAGTGAATGATGAGAACAATGCAGCCTTTCTTGGAGCAAAATCATATTCTCTAGGAGGGCAAaatacctatatatatactggTTTTCTTGAAGATGTCAATGCATATCGTAATATTAATGAAACCTCATCATGTTCCATGCAAGAACCTAAAATTCCAAATGATGATGCTATGGAAAAATTGAATGGAGCAAAACATGCACTCTTTAATGGTGCAAAATCATCTTCTTTAGTGGAGCAGAGTAGTTGTAATTCTACTGGGTTACTCAATGATGTCGTCAATGAATGTAGGAAAACTGATGGAACATCAGTCTCTTCCGTAAAAGAACTTGAAAATCATAAGGGAAAAGAAGTGGTCACTTCAGATAATGTggaagcaaaagaaacaagCGGTGCTGTTATAGAGACAGTGGAAGATGATCTTATGGATAAAATTCTAGCTGAATTTGATTCCTTTCCGAGGAAAGAGCAGGATAACATGGACACAGATCTTGGTGATGCCTTTTGGGACGGTCTAGGAAATATTACAGACAATATTTA 1433 0.3636 MDKDLAIYESVPDEFKNSDGSAKKEYIEKVIVEGYKFEPTDEELLAFYLKKKVNGEELPFHVIHEDNVYDYSPEELTGKYELYKTTTEWYFFTKRTAKYLNGKRPDRTAGTTGYWKANGVDRKIRVKGEIIGSKRCLDFFYGLDRKNSKRTNWKMHEYVLAKKNIPPSCKRTRDGKKLLDEYVLCCIYKHDKRRNHQSDDNDEEPEDHNGHQQILGSTLLPQGNDALMATDINRPESSNQGSYFYDNTTTTLKFSNAETGLIHNYENSSSFIVMHPTGLGFLTSNIAEVVDPSANVMDKVNDENNAAFLGAKSYSLGGQNTYIYTGFLEDVNAYRNINETSSCSMQEPKIPNDDAMEKLNGAKHALFNGAKSSSLVEQSSCNSTGLLNDVVNECRKTDGTSVSSVKELENHKGKEVVTSDNVEAKETSGAVIETVEDDLMDKILAEFDSFPRKEQDNMDTDLGDAFWDGLGNITDNI 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03184 477 PANTHER NAC TRANSCRIPTION FACTOR 56 30 278 - -
Bva06g03184 477 PANTHER NAC DOMAIN-CONTAINING PROTEIN 102-LIKE 30 278 - -
Bva06g03184 477 SUPERFAMILY NAC domain 33 189 IPR036093 GO:0003677|GO:0006355
Bva06g03184 477 Gene3D NAC domain 40 195 IPR036093 GO:0003677|GO:0006355
Bva06g03184 477 ProSiteProfiles NAC domain profile. 31 190 IPR003441 GO:0003677|GO:0006355
Bva06g03184 477 Pfam No apical meristem (NAM) protein 33 160 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03184 Bva-Chr6 20167577 20170034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g03184 31 205 NAC Transcription Factor Family AT3G04070 39.791 4.12e-35 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva06g03184 NAM 8.4e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03184 - - pmum:103339468 167.162