Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03175 ATGGGTATCTCATTCCATTTGTTTCTTCTCCTCTTGGCTATgtcttttcaatatttatgcTCATCATCTAGTAATGTCCTAACCCTCTCAGTGGAGAAGCCTGAAGATGTTATAGTATCAAAAAATGGCATGTTCTCTGCTGGCTTTCATGCAGTTGGTGAAAATGCCTATTGTTTTGCCATTTGGTTTACCCAAAATCCCACAATTATTTGGGTGGCAAATGCAGACCAACCTGTGAATGGAAAGCGCTCAACACTTTCTCTTCTCAAGAATGGTAATCTTGTCTTGACTGATGCTGGTGAGTTCAATGTATGGTCCACAAACACAGAATCATCGTCTGAGTTTCTCGAATTGGTTCTCGAAAACAATGGTAATCTTGTTCTACGTGAGATTCATGGTTCCATTCTATGGCAAAGTTTTGATTTCCCAACAAATACACTGCTTCCGGGTCAACAACTCACTAGACCCATAAAGCTAGTGTCCTCAAGAAGTGACACAAACCTTTCCTCTGGTTTCTATAAGCTGTTCTTCGACAACGATAACATTCTTCGTCTTCTCTACGATGGCCCTTCGATTTCAAGTATTTACTGGCCAGATCCTTGGATTTCATCTTGGGCAGCTGGAAGGTCCACCTATAATGACACTAGGGTGGCAGCTCTTGATTCCCTAGGTCATTTCAGTTCATCAGATAACTTTAAGTTCTGCACATCTGATTGTGACCTACTGATTCAAAGAAGATTGACATTAGATTATGATGGTAATCTTCGAGTATATAGCCGAAAACACGAGGCCGATGAATGGTATGTTTCATGGCAAGTGAAGTCCAATCCTTGCAAGATTCATGGCCTTTGTGGACCTAACAGCACATGTTCATATGATTCCAAGCATGGAAGAACATGTTCTTGTCTTCCAGGGTATAGGGTGAAGAATGATAGTGATTGGTCTTATGGGTGTGAACCAAAATTTAACCTTTCTTGCAATAGAGGAGAGTCTTCATTCCAACTATTGCATTATGTTGAATTCTATGGCTATGACTATTATTATCAAGAAAATTCCACCTATACTAAGTGTTCCAATATATGCTTGGAGTCTTGTGAATGCAAAGGGTTCCAGCTCAATTTTGAGAACGATAAAGGCACATTTACATGCTATGCAAAATTGCTACTGCTTAATGGACAACGTTTACCAGGTTTTAGAGGGACAACATACTTGAGAGTACCCAAAGGGATGAACAATCTCTCCTCTCATATAGAATCCGGCGGTGAATGCAATCGTGttaattttgtgaaatttcaGAGAGTTTACACTAAAGAACAGGTAAGTAGTTTTCAGAAGTTCTTTCTATGGTTTGTATCTGCACTTGGAGCATTGGaaattgttagtttctttttgatCTGGGTTTTTCTAAGAAGAACCCACCAAAAGTCTATTACATTTCAACAAGGCTACCATCCTGCCACTGCTGGGTTCAAAAGATTCTCGTATGCAGAATTGAAAGATGCAACGAGAGGGTTTAGTGAAGAGATTGGAAGGGGTGCAGGAGGTGTTGTTTACAAAGGTGTCTTGTCAGATCAAAGAGTTGCAGCAATAAAAAGACTCAATGAAGCAAATCAAGGGGAAGGAGAATTTTTAACTGAAGTAAGTATTATTGGAAGGCTTAACCACATGAACTTGATCGAAATGTGGGGTTATTGTGCTGATGGCAAGCACAGGCTACTGGTGTATGAGTACATGGAGAATGGTTCGTTGGCAACAATTGTCATGTCGGACACACTTGATTGGAGAAAGAGGTATGAAATTGCTCTTGGTATGGCAAGAGGTCTAGCTTATTTGCATGAAGAATGCTTAGAGTGGATTTTGCATTGTGATATCAAgcctcaaaatatatttttagattctGATTATCAACCCAAAGTAGCTGATTTTGGTTTGAGTAAGCTACAAAATCggaataacttaaataatctGATCTTCTCAACGATTAGAGGTACCAGAGGTTATATGGCACCAGAATGGATTTTCAAATTACCAATCACATCTAAGGTAGATGTTTACAGTTATGGTATTGTTGTCCTTGAGATGATAACTGGAAAGAGCTCAACAATGGGCATCCAAACTGTGGACGGAGTAGAGGAACATCATGGGAGTCTTGTAACATGGGTGAGACGGAAAAGAAGTGAAAGATTTGGCATGGCATCTTGGGTGGAGGAAATCATTGACCCTGAGATGGAAGCAAACTACGATATAAACATGATGGAAATTTTGGCAATAGTGGCTTTGAATTGTGTCGAGGAAAGCAAAGATTCAAGGCCAACTATGAGTCAAGTAGTTGAGATGCTTGAAAGCCATGAAAATGTGATTCCCAGGGATTATGATGGCTCATG 2384 0.3876 MGISFHLFLLLLAMSFQYLCSSSSNVLTLSVEKPEDVIVSKNGMFSAGFHAVGENAYCFAIWFTQNPTIIWVANADQPVNGKRSTLSLLKNGNLVLTDAGEFNVWSTNTESSSEFLELVLENNGNLVLREIHGSILWQSFDFPTNTLLPGQQLTRPIKLVSSRSDTNLSSGFYKLFFDNDNILRLLYDGPSISSIYWPDPWISSWAAGRSTYNDTRVAALDSLGHFSSSDNFKFCTSDCDLLIQRRLTLDYDGNLRVYSRKHEADEWYVSWQVKSNPCKIHGLCGPNSTCSYDSKHGRTCSCLPGYRVKNDSDWSYGCEPKFNLSCNRGESSFQLLHYVEFYGYDYYYQENSTYTKCSNICLESCECKGFQLNFENDKGTFTCYAKLLLLNGQRLPGFRGTTYLRVPKGMNNLSSHIESGGECNRVNFVKFQRVYTKEQVSSFQKFFLWFVSALGALEIVSFFLIWVFLRRTHQKSITFQQGYHPATAGFKRFSYAELKDATRGFSEEIGRGAGGVVYKGVLSDQRVAAIKRLNEANQGEGEFLTEVSIIGRLNHMNLIEMWGYCADGKHRLLVYEYMENGSLATIVMSDTLDWRKRYEIALGMARGLAYLHEECLEWILHCDIKPQNIFLDSDYQPKVADFGLSKLQNRNNLNNLIFSTIRGTRGYMAPEWIFKLPITSKVDVYSYGIVVLEMITGKSSTMGIQTVDGVEEHHGSLVTWVRRKRSERFGMASWVEEIIDPEMEANYDINMMEILAIVALNCVEESKDSRPTMSQVVEMLESHENVIPRDYDGS 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03175 794 ProSiteProfiles Bulb-type lectin domain profile. 23 141 IPR001480 -
Bva06g03175 794 Gene3D - 23 142 IPR036426 -
Bva06g03175 794 CDD PAN_AP_plant 322 407 - -
Bva06g03175 794 CDD EGF 277 307 - -
Bva06g03175 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Bva06g03175 794 Gene3D Phosphorylase Kinase; domain 1 468 577 - -
Bva06g03175 794 PIRSF SRK 1 791 IPR024171 GO:0004674
Bva06g03175 794 Gene3D - 143 270 IPR036426 -
Bva06g03175 794 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 5 784 - -
Bva06g03175 794 SUPERFAMILY Protein kinase-like (PK-like) 487 781 IPR011009 -
Bva06g03175 794 ProSiteProfiles EGF-like domain profile. 274 312 IPR000742 -
Bva06g03175 794 Pfam S-locus glycoprotein domain 240 309 IPR000858 GO:0048544
Bva06g03175 794 Pfam D-mannose binding lectin 68 155 IPR001480 -
Bva06g03175 794 ProSitePatterns Protein kinases ATP-binding region signature. 509 531 IPR017441 GO:0005524
Bva06g03175 794 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 198 IPR036426 -
Bva06g03175 794 CDD STKc_IRAK 509 781 - -
Bva06g03175 794 CDD B_lectin 38 143 IPR001480 -
Bva06g03175 794 SMART blect_4 26 143 IPR001480 -
Bva06g03175 794 SMART serkin_6 503 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g03175 794 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 5 784 - -
Bva06g03175 794 Pfam Protein kinase domain 506 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g03175 794 ProSiteProfiles Protein kinase domain profile. 503 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g03175 794 Gene3D Transferase(Phosphotransferase) domain 1 578 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03175 Bva-Chr6 20025786 20028170 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g03175 493 786 Trihelix Transcription Factor Family AT5G38560 42.000 3.67e-63 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bva06g03175 Pkinase 2.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03175 - - gmx:100783758 1005.74