Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03163 ATGGAGATCATTGGTGCCATTTTGGTGTGGGGTCTCTTGTTTAGAAGCCAAAGAAAGCATGATGCATACACAGAAGGTTACCTTCCAATTGGCACTGGATTCAGAAAGTTTAGCTACTCAGAGCTGAAAAAGGCAACCCATGGTTTCAGTCAAGAGATTGGAAGAGGTGGAGGAGGGATTGTCTACAAGGGCAAATTGTCCGATAATCGAGTTGCAGCAATAAAGAGACTCAATCTAGCGAGTTCTCAAGGAGAAGAAGAGTTTCTTGATGAAGTAAGTGTTATTGGAAGGCTTAACCATATGAACTTGATCAAAATGTGGGGATATTGTGCAGAGGGCAAGCACAGGCTATTGGTATATGAGTACATGGAAAATGGTACTTTAGCAGAAAATTTAAGGTCAAAAGCATTGGATTCGAATACAAGATTTAGTATTGCTTTGGGTATGGCAAGAGGTCTAGCTTATTTGCACGAAGAATGTTTGGAGTGGatcttgcattgtgatatCAAGCCTCgaaatattctttttggttaTGATTATTA 542 0.3819 MEIIGAILVWGLLFRSQRKHDAYTEGYLPIGTGFRKFSYSELKKATHGFSQEIGRGGGGIVYKGKLSDNRVAAIKRLNLASSQGEEEFLDEVSVIGRLNHMNLIKMWGYCAEGKHRLLVYEYMENGTLAENLRSKALDSNTRFSIALGMARGLAYLHEECLEWILHCDIKPRNILFGYDY 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03163 180 Pfam Protein kinase domain 50 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g03163 180 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Bva06g03163 180 SMART serkin_6 47 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g03163 180 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Bva06g03163 180 Gene3D Phosphorylase Kinase; domain 1 14 122 - -
Bva06g03163 180 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 1 180 - -
Bva06g03163 180 Gene3D Transferase(Phosphotransferase) domain 1 123 180 - -
Bva06g03163 180 SUPERFAMILY Protein kinase-like (PK-like) 30 179 IPR011009 -
Bva06g03163 180 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 180 - -
Bva06g03163 180 ProSiteProfiles Protein kinase domain profile. 47 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03163 Bva-Chr6 19918919 19920245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g03163 1 176 Receptor kinase-like Gene Family AT1G56120 44.751 3.73e-41 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bva06g03163 Pkinase 7.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03163 - - tcc:18598047 251.136