Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03150 ATGTGTCCAGCAAGTTCATCATCAAGATGGTGTCCAACGCCAGAACAGCTTATGATTCTGGAGGAAATGTACAGAAATGGAGTTAGAACACCCAATGCTTCACAAATTCAACACATCTCTGCCCACCTATCTTTCTATGGCAAGATTGAAGGTAAGAATGTTTTCTATTGGTTTCAGAACCATAAAGCAAGAGATAGACAGAAACTCAGAAGGAAATTGCACAAGCAGCTTCAGCttcaacagcagcagcaaatGTATTATCAACACTTGAGTCAGAGAAACCATTTTCCCTATGATCTGGAGCCTGTTTATGGTTCAGCTTCAAATATTTCCACCCAGCAACTTCCATTCTATAACTCTTTTGGCTCGTCTCATCAagagAGAGGAGCTATAGAAGCAATATCCAAACATGCTATAAATCATCCCTGGAAAATGGATAAACCAGAGGGATTGATGGAAAATACAATGCTGAAATTCTATAAAGAAGATTGGACAATGACGGTGAATGTGAGTCCCACTCCATGTTCTTGCCCTAATTCCCTCAAGACTCTTGAACTTTTCCCAATCGCAGAAAGACTTAAAGCAGCTGATCAGTGCAGCAAATCAAAGGCAGTTTCTGAAACATA 626 0.3866 MCPASSSSRWCPTPEQLMILEEMYRNGVRTPNASQIQHISAHLSFYGKIEGKNVFYWFQNHKARDRQKLRRKLHKQLQLQQQQQMYYQHLSQRNHFPYDLEPVYGSASNISTQQLPFYNSFGSSHQERGAIEAISKHAINHPWKMDKPEGLMENTMLKFYKEDWTMTVNVSPTPCSCPNSLKTLELFPIAERLKAADQCSKSKAVSET 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03150 208 Pfam Homeodomain 7 67 IPR001356 GO:0003677
Bva06g03150 208 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 202 IPR044555 GO:0003700|GO:0099402
Bva06g03150 208 SMART HOX_1 5 72 IPR001356 GO:0003677
Bva06g03150 208 Gene3D - 3 68 - -
Bva06g03150 208 PANTHER WUSCHEL-RELATED HOMEOBOX 3 1 202 - -
Bva06g03150 208 SUPERFAMILY Homeodomain-like 8 68 IPR009057 -
Bva06g03150 208 ProSiteProfiles 'Homeobox' domain profile. 3 68 IPR001356 GO:0003677
Bva06g03150 208 CDD homeodomain 9 68 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03150 Bva-Chr6 19792030 19793484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g03150 6 190 Wox Gene Family AT2G28610 41.423 9.95e-39 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bva06g03150 Homeodomain 7.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03150 - - dzi:111284239 178.718