Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03143 ATGTCAAGCAAATTCAATACACGGAGAGCTTTGGCAGATGGGTGTTATGGAGTTTTACTGTTATTAACTCTACTTTATACCACTGAAGGGTTGAACTTAGAGGGGCAGTACCTTCTAGAGCTGAAGAATAATCTTCATGATGAATTTAACCATTTGGGAAATTGGAAGTCTACTGATGAAACTCCATGTGGTTGGGTAGGCGTAAATTGCTCTTCTGATTACAATCCGGTGGTTCTGTCCCTTAACTTGAGTTCGATGAACCTTTCGGGAACTCTAAATGCTAGTATTGGGGAGCTGACCCACCTAACATATCTCAATCTTGCTTACAATGGCCTGTTGGGAAATATACCCAAGGAGATTGGAAATTGCTCGAGGTTGGAATATCTCTAtttgcataataataattttgaggGCCAAGTTCCAACTGAACTGGGTAAACTGTCCCGTTTGAAGGGTTTGAATATATGCAATAACAGAATATCTGGTACTATTCCAGATGAATTTGGAAACTTGTCTTCATTGGTTGAGTTTGTGGCCTATACGAACCTTCTCACTGGCCCACTGCCTCATTCTATCGGAAATCTTAAGAGTCTACAAACTTTCAGAGCTGGGGCAAACAGCATCTCTGGTAGCTTGCCACGAGAAATTGGTGGATGTCAGAGCTTGGAATATCTTGGTCTGGCCCAAAATCAGATAGGAGGGGAACTTCCAAGTGAGGTTGGGATGCTTGggaatttaaaagaattgattttatGGGAAAACCAATTGTCAGGATCTATTCCTAAAGAGCTTGGGAACTGTAGCAGCCTTGAGACCCTTGctttatattcaaataatcTTGTTGGGCCAACACCTGTGGAAATTGGGAACCTTAAGTCATTGAAGAGGTTGTATCTTTACAGAAATAAGTTGAATGGAACCATTCCGAGGGAAATTGGGAATCTTTCATCAGCAATAGAAATTGATTTCTCAGAAAACTCTTTAGTGGGTAATATCCCTACTGAGTTCAGCAAAATAACTGATCTACACTTGCTGTTTCTGTTTGAGAACCATCTCACTGGTATCATACCAAATGAGTTTAGTAACTTGAGGTACTTGAGAAGGTTGGACCTCTCAATTAATTCTCTTACAGGTCCAATTCCATCTGGGTTCCAATACTTGACTGAAATGACTCAGTTGCAACTTTTTGACAACTCTCTAAGTGGTAATATTCCTCAGCGCCTTGGACTCTATAGTGTTCTTTGGGTGATTGATTTTTCTGACAACCAGCTGAGTGGAAGCATACCTCCAGATCTCTGTCGACACTCTAACTTGTCTTTCTTGAATCTGGCATCTAATCAGCTGTCTGGAAATATTCCTACTGGGATTTTGAACTGTAAATCGTTGAGGCAACTGATGTTGGGTGGAAACAGATTTACTGGCAGTTTCCCTTCAGAGTTGTGTAAACTGGTGAACCTTACTGCCATTGACCTGACTCAGAACAGCTTCAGTGGTCCTATCTCTCCTGAGATTGGAAATTGCAGGAAATTGCAAAGACTTCATATTGCTGAGAATTACTTCACATTAGAGTTTCCTGACGAAATAGGAAATCTCTCTCAGTTAGTGACTTTTAATGTTTCATTGAATTCTTTTACTGGACAATTCCCACGTGAAATTGATAGATGCAAAAAGCTTCAGCGACTTGATATCAGTCATAACAGCTTCATTGGTTCCTTGCCAGAAGAGCTTGGAACACTTTCAGAGTTGGAGCTTCTCAGTCTCTCGGACAACAAACTCACCGGAAATATCCCTGCATCTTTAGGTAATCTTTCTCACTTGACTGCATTGCAGATGGGTGGCAATTTACTTTCTGGTGAAATACCTCCTGAGTTGGGTTCTCTTTCAAGCTTACAGATTGCTATGAATCTCAGTTACAATAATCTTACTGGAAGGATTCCATTTGAACTTGGCAATCTCAATTTGCTTGAATTCCTTTTTCTCAATAACAATCATTTGGATGGCAAAATTCCTAGTACATTTGATAATCTTTCAAGTTTACTGGGATGCAATTTCTCATACAACAACCTCTCAGGACCTATTCCTTCTGTTCCCGTGTTCCAACATATGCCAATAAATAGCTTTACCGGTAACAGAGGCCTCTGTGGTGCTCCTCTCAGTGATTGCAACACTAATCCATCTTCTCGATCCATTCCTCCTGTGAAAAGTGCTGACTCTTCTCGGGGTAAAATTGTCATTATAGTTGCAGGTGCTGTTGGCAGTGTTTCCCTTGTTTTAATCTTAGTTATGCTATATATTATGAGACGTTCTCCCAAGACAGCTGTTCTTTCTTCACCGAGGGATTCCGAGACTCCTTCCCCAGATtcagatatatattttcctcCAAAAGAAGGTTTTACCTTCCAAGATTTAGTTGAAGCTACGGATAATTTTCATGACAGGTATATTATTGGAAGGGGAGCTTGTGGAACAGTTTATAAGGCAGTGATGCAATCTGGGAAGACCATTGCTGTTAAGAAGTTAGCATCTAACAGAGAGGGGAACAACATTGAGAGTAGTTTTCGGGCTGAGATACTAACTCTTGGAAATATAAGGCATCGAAATATAGTGAAGCTGTATGGCTTTTGCTATCACCAGGGTTCCAATCTCCTACTTTATGAGTTCATGGCAAGGGGTAGCTTAGGTGAAATACTTCATGGttctgtttttaatttggaatGGCCTGCTCGATTCAAGATTGCTCTTGGAGCTGCTGAGGGTCTTACCTACTTGCATCATGACTGCAAACCAAGGATTATTCACCGTgatataaaatctaataacATTCTTCTTGATGATAAGTTTGGGGCCCATGTTGGTGATTTTGGTTTGGCCAAAGTGATTGACATGCCTCAATCAAAGTCAATGTCAGCAGTTGCAGGATCTTATGGGTATATTGCTCCTGAATATGCATATACTATGAAGGTCACTGAAAAGTGTGACATTTATAGCTATGGCGTGGTTCTGTTGGAGTTGCTAACGGGAAGAACTCCGGTTCAGCCCATAGAAGAAGGTGGCGATCTTGTGACATGGACAAGACACCATATCCGGAATCATAACAATACATTGACGTCTGAGATACTTGACAATCGTCTGAATCTTCAAGACCAAGTTACTGTGAGTCACATGATTACTGTTCTGAAAATTGCTTTACTGTGCACAAAGTTGAACCCTACTGAAAGGCCATCGACAAGGGAAGTGGTGTCGATGCTTATCGAATCAAACGAGCGAGAAGGGAACTTAACCCTCTCTCCGGACTA 3296 0.4008 MKVTEKCDIYSYGVVLLELLTGRTPVQPIEEGGDLVTWTRHHIRNHNNTLTSEILDNRLNLQDQVTVSHMITVLKIALLCTKLNPTERPSTREVVSMLIESNEREGNLTLSPD 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03143 113 Gene3D Transferase(Phosphotransferase) domain 1 1 110 - -
Bva06g03143 113 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 1 106 - -
Bva06g03143 113 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 106 - -
Bva06g03143 113 ProSiteProfiles Protein kinase domain profile. 1 110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g03143 113 Pfam Protein tyrosine and serine/threonine kinase 2 98 IPR001245 GO:0004672|GO:0006468
Bva06g03143 113 SUPERFAMILY Protein kinase-like (PK-like) 2 100 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03143 Bva-Chr6 19739597 19745477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g03143 1 104 Receptor kinase-like Gene Family AT1G08590 41.905 2.24e-21 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva06g03143 PK_Tyr_Ser-Thr 6.2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03143 - - gmx:100805792 186.037