Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03142 ATGATGAAGGCCCTCGTCCCTGACCTCTCGACCCTTCCTCTCTCACTCCCTCAATTTATCAACCCGCGTGTCTCTTCtgcgttttcttttttcctcgcTGTGCATAAAAAATCCCAGCTCCAACTGGTGTGGCCCTTGGGCAATACTCgaagcaaaatcaaaaaagGGATGGAGTCCCTTGGTTTCATGGATGGACTCTTGGATTTCTCATCAGACAATGAGGAAGACAAACCCCAGAAAGTCCTTCCTTCACTTAACCCAAATTCCAGTGATCCAACATCCTTCAATGCTTTGGACCCAGATGATCCTAGCCAGTCATTTTCCGAATTTGTGGAAGAAGAGCTTGAATGGATATCTAACAAAGATGCATTTCCTGCTGTTGAAACATTTGTTGACATAGTTGCAATTCAACCCAACATATCAAGGCACCAAAACACAATCTCAATGACTGAATACAGCACCAGCAGTACCAACAGTAACAACAGCAATAACAGCAGTGCCCTATTAAGTTTCTATGATCACCTGAAGGTCCCTGTCCGGGCACGGAGTAAGCGTCGCAGTAGGTGTCATCACGGCCAAGCTGACATTTCTAGCCAGCAGTTCTGGTGGAGGCAAATGGATAACAAAGTTGCCAAAGAAGAATCGGTAATAACAGTCTCAACAATTGGGAGGAAATGCGAGCATTGTGGAGCAGAGAAAACACCGCAATGGCGGGCAGGTCCCCTTGGGCCAAAAACACTTTGTAATGCATGTGGGGTTAGGTATAAGTCAGGGCGACTTGTGCCTGAGTATCGCCCAGCAAGTAGCCCAACTTTTTGTAGCGAGTTGCATTCTAATTCACACAGGAAGATAGTAGAGATGAGGAGACAAAAGCAAGCAGTGATGGTGTTTAAGGCCCGGGGTAAAGGCTA 911 0.4479 MMKALVPDLSTLPLSLPQFINPRVSSAFSFFLAVHKKSQLQLVWPLGNTRSKIKKGMESLGFMDGLLDFSSDNEEDKPQKVLPSLNPNSSDPTSFNALDPDDPSQSFSEFVEEELEWISNKDAFPAVETFVDIVAIQPNISRHQNTISMTEYSTSSTNSNNSNNSSALLSFYDHLKVPVRARSKRRSRCHHGQADISSQQFWWRQMDNKVAKEESVITVSTIGRKCEHCGAEKTPQWRAGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFCSELHSNSHRKIVEMRRQKQAVMVFKARGKG 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03142 303 Pfam GATA zinc finger 226 259 IPR000679 GO:0006355|GO:0043565
Bva06g03142 303 MobiDBLite consensus disorder prediction 82 103 - -
Bva06g03142 303 SMART GATA_3 220 270 IPR000679 GO:0006355|GO:0043565
Bva06g03142 303 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 222 283 - -
Bva06g03142 303 ProSitePatterns GATA-type zinc finger domain. 226 251 IPR000679 GO:0006355|GO:0043565
Bva06g03142 303 ProSiteProfiles GATA-type zinc finger domain profile. 220 256 IPR000679 GO:0006355|GO:0043565
Bva06g03142 303 PANTHER GATA TRANSCRIPTION FACTOR 1 63 292 - -
Bva06g03142 303 MobiDBLite consensus disorder prediction 73 105 - -
Bva06g03142 303 CDD ZnF_GATA 225 272 IPR000679 GO:0006355|GO:0043565
Bva06g03142 303 Gene3D - 220 271 IPR013088 GO:0006355|GO:0008270
Bva06g03142 303 PANTHER GATA TRANSCRIPTION FACTOR 63 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03142 Bva-Chr6 19719185 19726168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g03142 57 293 C2C2-Gata Transcription Factor Family AT3G24050 39.928 1.37e-50 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bva06g03142 GATA 8.5e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03142 - - gmx:100784527 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g03142 06 19719185 19726168 Bva06g03142 06 19719185 19726168 ECH