Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03113 atgGCttctaaaatcaattttatagtTGGATCTAATGTTTGGGTTGAGGACCCGGAGGTATCTTGGATAGATGGAGAAATTGTGGAAGTTAATGGCGACTCAATCAAGATTAACTGTACATCAGGGAAGATGGTTGACGCCAAACCGTCTAATATCCATCCCATGGATCCTGAGTTTCCTCCCTCTGGAGTCGAAGATATGACGAAGCTAGCATATCTACATGAGCCAGGGGTTCTTTTGAATCTGAAGTCTCGATATGATATAGATGAAATCTATACGTATACAGGGGGAATATTGATAGCTGTAAACCCTTTTCAAAGATTACCTCAATTTTATGGCAGTGAAGTGATGGGAAAGTATAAAGGGGCCGTTCTTGGTGAGCTGAGCCCTCATCCTTTTGCAATTGCAGATACTGCATATAGGATGATGATAAATGAAGGAGCAAGCCAATCCATTTTGGTCAGTGGAGAAAGTGGAGCTGGTAAAACAGAGAGTACAAAGATGCTTATGCAATATCTCGCCTTTATGGGAGGAAGAAGGGAATCGGAGGAACGGTCAGTGGAACAACAGGTTCTAGAGTCTAATCCTGTTTTGGAAGCATTTGGCAATGCAAAGACAGTCAGAAACAATAACTCAAGTCGTTTTGGTAAGTTTGTGGAGCTTCAATTTGATCGTAAGGGGAGAATTTCAGGAGCTGCTATCAGAACTTATTTGCTGGAAAAGTCCCGCGTCTGTCAAGTTTCTGATCCTGAGCGAAATTATCATTGCTTTTATATGCTATGTGCTGCACCAAAAGAgGTTATTGATGGGTACAAATTGGGAAATCCAAGAACATTTCATTACCTAAATCAATCAAATTGCTATGAGCTGGAAGGGTTAGATGAATCTAAGGAGTATCTTGCAACTAGGAGAGCTATGGGTGTTGTTGGGATCAGTTCTGATGAGCAGGAAGCTATATTTCGAATTGTGGCAGCAATACTTCATTTAGGAAACATTGAATTTTCCAAGGGAGATGAGGCGGATTCCTCCCAGCCCAAGGATGATCAATCTCGTTTTCATCTCAAAACTGCTGCAGAACTTTTCatGTGTGATGAGAAATCTCTTGAGGACTCTTTGTGCAAACGTGTTATTGTTACACGTGGAGAGGCGATAACAAAATGGCTTGATCCACAGTCTGCGGTTCTCAGTAGAGATGCCTTGGCTAAGATAGTTTATTCAAAACTGTTCGATTGGATGGTGAACAAGATTAACAACTCCATTGGTCAAGATAAGGATGCAAAAAACATAATCGGGGTTCTGGATATATATGGATTTGAGAGTTTCAAGACAAACAGCTTCGAgcaattttgtattaatttgacCAATGAGAAATTGCAGCAACATTTCAACCAGCATGTCTTCAAAATGGAGCAAGAGGAATACACGaaggaagaaattaattgGAGTTATATTGAGTTCGTTGATAATCAGGATGTCCTTGATCTCATTGAGAAGAAACCTGGCGGTATCCTTGCTCTTCTGGATGAGGCTTGTATGTTCCCAAGATCAACACATGAGACATTTGCTGAAAAACTATATCAAACTTTTAAAGACAATAAACGCTTCAGCAAGCCGAAGTTGGCACGCAGTGACTTCACTATTTCCCATTATGCTGGTGATGTCACTTATCAAACTTTGTTGTTTCTTGATAAGAACAAAGACTTTGTTGTTCCGGAGCACGAGGCATTACTTGCTGCTTCTAAGTGCCCCTTTGTTTCAGGGTTGTTCCCTCCTTCACCTGAGGAATCTTcgaaatcatccaagttctcTTCAATAGGCACTAAGTTTAAGCAACAACTGCAATCTTTGCTTGAAACACTGAATGCTACTGAGCCACAATATGTTCGTTGCATAAAGCCAAATAATCTTCTTAAGCCAGGGATATTTAATAATAGCACCGTGTTGCAGCAGCTTCAATGTGGGGGAGTCATGGAGGCAATTAGGATAAGCTGTGCTGGATATCCCACCAGAAAGACCTTCAGTGAATTTGTTCGCCGTTTTGGTGTTTTGTCACCCGAGATTCTAAAAGGATGCCCTGATGAGGTGACTGGTTGCAAGAGGCTTCTAGAGAAAGTGAACCTGGAAGGCTATCAGATTGGCAAGACAAAAGTGTTTTTGAGAGCAGGTCAGATGGCAGAACTAGATGGATTTAGAGCTGAGGTCTTAGGAAGATCAGCAACCATTATTCAGAGGAGAACTCGCACATATTATTGTCATAAGAACTTCACTTTATTGAGGTTGTCAGCCATAGAGATACAAACCATTTGTAGAGGAGAACATGCACGGCGACATTATGACTACTTGAGGAAGCAAGCTGCCGCTGTGAAAATCCAACAACACTGTCGGAAGTATCTTGCTAGAAAAGCTTACAAAAGTTTGTGCACATCAGCTGTTTGTATTCAAACCTCTATGCGGGCAATGGCTGCTCGAATTGAGCTGACTTTCAGGAAGCGGAAGACAGCTGCAGTTATTATTCAAAGTTATTGCAGACGTTATTTAGCTCGCATATATTTCCTAAGGCTAAAGAGAGCAGCAATCACTGCACAGTGCTGGTGGAGAAGAAGAACTGCATGTAGAGAACTTCGAAAACTTAAAATGGCTGCTAAGGATGCTGGTGCTCTCCAGGAAGCCAAAATTAAACTAGAAAAGCAAGTTGAAGAACTGACTGAAAATCTAGAATTGGAGAGAAAGATGAGGGCTGATATTGAGGAAGCAAAGGCACAGGAAAATTCCAGACTGCGTGCTGCTTTGCATGAGATGGAGCTTCAGTTTAAAGAAACCAAAGCGCTGCTCATTCAGGAGCGTGAGGCTACAAAAAGGGCAGCTGAGGGAACCCCAACTATGATGGAGCTTCCCGTTTCCGATAATGAATTGATCAATAAGCTTACAGcagaaattcaaaatctaaAGGCAGAGGCTGCGAAAAGAGCAGCTGAGCAAACTCCAATTATCAACAAGGTTCCTGCTGTTGATGATGAATTGATCAATAAGCCTAcagcagaaaatgaaaatctaaaGGTACAAGAGGCCGTAACAAAAACAGCTGAGCAAACTCCAATTATGCAGGAGGTTCCTGTTAGTGATAATGATTTGATCAATAAGCTTACagctgaaaatgaaaatctaaaGGCACAGGTTACTTCATTAGAAAAGAAAGCTGATGAAACAGAGAAGCATGCTACAGAGGCTGAATTGAAGATAATTGAGCTGAAGACAGCAATGCAGAGGCTTGAAGAGAAACTCTCTGATATGGAAACAGAGGATCAGATTCTGAGGCAGCAAGCTCTAAGTTCAGCTTCTAAGAGACTGTCTGAACATGTATCATTTGATAAAGCTCAGGCTTCGGAAAATGGTGATCAAGAACAGGAATCTCCTTCAAGAAAGGCTGGGACAGAGGCTGATGCATCTCAAATTGAAAGGCCACAAGAAACTATAGATACCCTCCTCAAGTGTGTAGAAGGAGATCTTGGGTTCAGTGAAGGGAAACCCGTTGCAGCATTTACCATTTATAAGTGTCTGCTCCACTGGAAATCTTTTGAAGCAGAGAAGACAAGTGTATTTGACCGTCTTATCCAGTTGATTGGCGCTGCTATAGAGGATCCGGAGGATAATAATCGTATGGCTTATTGGTTGTCTAATACTTCCGGTTTGTTGTTCATTCTTCAGCAAAGTCTGAGATCTTCATCACGGAAACCTCCCACTCCAACTGGGTTTTTTGGGAGGATGGCCCAGGGTTTTCGTTCATCTTCCGATTCCATGAATCTTTCTAGCGATGAACTCAGCGTAGTGCGCATTGTAGAGGCCAAGTATCCGGCTTTGCTTTTCAAGCAGCAGCTTACAGCATATGTGGAAATTATTTATGGAATCATTCGGgacaatttaaagaaaaatttgtcaCCGCTGCTTTCTTCTTGCATTCAGGCACCCAAAACATCAGAGGGAAGTGCTGCAGAATCATCCGATCAGTCGAATAGCAATAGTCCATCAGCTAGTTCTTGGCACAACATCATTGACTGCCTTAATAAGTTTTTCAATGCgttaaaagaaaactatgTGCCTGCCGTTCTTGTACAGAAGATTTTTACTCAGATTTTCTCATATATCAATGTCCAACTATTCAATAGCCTTATTGTGCGTGGTGAGTGCTGCACATTCAGCAACGGGGAATATGTTAAATCTGGGTTAGATGGACTGGAAAAATGGTGTGATGAAGCAACTGAGGAGTATGTTGCTACATCTTGGGATGAACTCAAACATATAAGGCAAGCAATCGGATTCCTGATTATAAGTCAGAAGTCAGAAGTATCTTACGATGATCTTACACATAAAATTTGCCCtGTCCTGGGTGTTCAACAGCTCTATAGACTATGTACACTGTCCCCGGATGAGAATGACAATACCAAAAATGTATCACCAGAAGTTATTTCTAGCATGAAGCTTCTAATGACAGACAATGCAAATGACGATGAGAACTCCTACTTGTTGGATGACGTTTCCAGTGTTCCTTTCGCCATTGATGATATCATTAGTGCACTTCATGACAAGACCTTTAGAGATGCCAAACCTCCAGAAGAACTACTTGAGAATCCAgactttgaatttttgaagTA 4649 0.4022 MASKINFIVGSNVWVEDPEVSWIDGEIVEVNGDSIKINCTSGKMVDAKPSNIHPMDPEFPPSGVEDMTKLAYLHEPGVLLNLKSRYDIDEIYTYTGGILIAVNPFQRLPQFYGSEVMGKYKGAVLGELSPHPFAIADTAYRMMINEGASQSILVSGESGAGKTESTKMLMQYLAFMGGRRESEERSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDRKGRISGAAIRTYLLEKSRVCQVSDPERNYHCFYMLCAAPKEVIDGYKLGNPRTFHYLNQSNCYELEGLDESKEYLATRRAMGVVGISSDEQEAIFRIVAAILHLGNIEFSKGDEADSSQPKDDQSRFHLKTAAELFMCDEKSLEDSLCKRVIVTRGEAITKWLDPQSAVLSRDALAKIVYSKLFDWMVNKINNSIGQDKDAKNIIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGILALLDEACMFPRSTHETFAEKLYQTFKDNKRFSKPKLARSDFTISHYAGDVTYQTLLFLDKNKDFVVPEHEALLAASKCPFVSGLFPPSPEESSKSSKFSSIGTKFKQQLQSLLETLNATEPQYVRCIKPNNLLKPGIFNNSTVLQQLQCGGVMEAIRISCAGYPTRKTFSEFVRRFGVLSPEILKGCPDEVTGCKRLLEKVNLEGYQIGKTKVFLRAGQMAELDGFRAEVLGRSATIIQRRTRTYYCHKNFTLLRLSAIEIQTICRGEHARRHYDYLRKQAAAVKIQQHCRKYLARKAYKSLCTSAVCIQTSMRAMAARIELTFRKRKTAAVIIQSYCRRYLARIYFLRLKRAAITAQCWWRRRTACRELRKLKMAAKDAGALQEAKIKLEKQVEELTENLELERKMRADIEEAKAQENSRLRAALHEMELQFKETKALLIQEREATKRAAEGTPTMMELPVSDNELINKLTAEIQNLKAEAAKRAAEQTPIINKVPAVDDELINKPTAENENLKVQEAVTKTAEQTPIMQEVPVSDNDLINKLTAENENLKAQVTSLEKKADETEKHATEAELKIIELKTAMQRLEEKLSDMETEDQILRQQALSSASKRLSEHVSFDKAQASENGDQEQESPSRKAGTEADASQIERPQETIDTLLKCVEGDLGFSEGKPVAAFTIYKCLLHWKSFEAEKTSVFDRLIQLIGAAIEDPEDNNRMAYWLSNTSGLLFILQQSLRSSSRKPPTPTGFFGRMAQGFRSSSDSMNLSSDELSVVRIVEAKYPALLFKQQLTAYVEIIYGIIRDNLKKNLSPLLSSCIQAPKTSEGSAAESSDQSNSNSPSASSWHNIIDCLNKFFNALKENYVPAVLVQKIFTQIFSYINVQLFNSLIVRGECCTFSNGEYVKSGLDGLEKWCDEATEEYVATSWDELKHIRQAIGFLIISQKSEVSYDDLTHKICPVLGVQQLYRLCTLSPDENDNTKNVSPEVISSMKLLMTDNANDDENSYLLDDVSSVPFAIDDIISALHDKTFRDAKPPEELLENPDFEFLK 1549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03113 1549 Gene3D - 11 55 IPR008989 GO:0003774|GO:0005524|GO:0051015
Bva06g03113 1549 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva06g03113 1549 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva06g03113 1549 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva06g03113 1549 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva06g03113 1549 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva06g03113 1549 CDD MYSc_Myo11 76 720 IPR036018 -
Bva06g03113 1549 Gene3D Kinesin motor domain 65 662 IPR036961 -
Bva06g03113 1549 ProSiteProfiles IQ motif profile. 831 860 IPR000048 GO:0005515
Bva06g03113 1549 ProSiteProfiles Dilute domain profile. 1201 1497 IPR002710 -
Bva06g03113 1549 SMART MYSc_2a 56 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva06g03113 1549 SMART iq_5 853 875 IPR000048 GO:0005515
Bva06g03113 1549 SMART iq_5 782 804 IPR000048 GO:0005515
Bva06g03113 1549 SMART iq_5 734 756 IPR000048 GO:0005515
Bva06g03113 1549 SMART iq_5 757 779 IPR000048 GO:0005515
Bva06g03113 1549 SMART iq_5 830 852 IPR000048 GO:0005515
Bva06g03113 1549 PANTHER MYOSIN 6 1548 - -
Bva06g03113 1549 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 785 IPR027417 -
Bva06g03113 1549 Pfam DIL domain 1373 1471 IPR002710 -
Bva06g03113 1549 Gene3D - 252 310 - -
Bva06g03113 1549 ProSiteProfiles IQ motif profile. 783 809 IPR000048 GO:0005515
Bva06g03113 1549 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bva06g03113 1549 CDD MyosinXI_CBD 1152 1519 IPR037975 GO:0007015
Bva06g03113 1549 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva06g03113 1549 Pfam Myosin N-terminal SH3-like domain 10 51 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bva06g03113 1549 MobiDBLite consensus disorder prediction 1119 1153 - -
Bva06g03113 1549 Pfam IQ calmodulin-binding motif 761 778 IPR000048 GO:0005515
Bva06g03113 1549 Pfam IQ calmodulin-binding motif 785 804 IPR000048 GO:0005515
Bva06g03113 1549 Pfam IQ calmodulin-binding motif 834 851 IPR000048 GO:0005515
Bva06g03113 1549 SMART DIL_2 1372 1479 IPR002710 -
Bva06g03113 1549 Gene3D - 833 882 - -
Bva06g03113 1549 Gene3D - 735 784 - -
Bva06g03113 1549 Gene3D - 785 832 - -
Bva06g03113 1549 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Bva06g03113 1549 Coils Coil 884 924 - -
Bva06g03113 1549 Coils Coil 972 992 - -
Bva06g03113 1549 Gene3D - 667 732 - -
Bva06g03113 1549 Coils Coil 1045 1107 - -
Bva06g03113 1549 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 784 882 IPR027417 -
Bva06g03113 1549 PANTHER MYOSIN-7 6 1548 - -
Bva06g03113 1549 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Bva06g03113 1549 Gene3D - 439 623 - -
Bva06g03113 1549 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03113 Bva-Chr6 19424245 19444376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g03113 1 1549 Myosins gene family AT1G04600 59.931 0.0 1990
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03113 K10357 - mnt:21394610 2113.58