Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03108 ATGGAAGAGGCCTCCCTTTGTGGTGAACAAGTGACAGACGGTGAATGTGATGAGGTTCAAAAAGAAGATGGTGTATTAACTAAATTAGATtgtcaaaatgatttttttgaaGGGAGAAAGGAATTTGTAGCACCTGCTGTTGGTATGGAGTTTGAATCATATGATGAtgcttataattattatatctgCTATGCCAAGGAAGTAGGATTTCGTGTAAGGGTGAAGAATTCATGGTTCAAGCGAAATAGCAGAGAAAAGTATGGTGCTGTACTTTGCTGCAGCAGCCAGGGTTTCAAAAGAGTGAAACATGTTAATCATTTGAGAAAGGAAACAAGAACAGGCTGCCCTGCAATGATAACGATGAGGTTAGTGGACACACAGAGGTGGAGAGTACTTGAAGTTACACTTGAGCATAACCACCTGTTAGGTGCTAAGATAtacaaatcaattaagaaaatgggTAGTGGAGCCAAAAGGAAGTCACTATCCGGTTCTCATGCTGAAGTGCAAACAGTTAAATTATATCGTGCACTTGTCATAGATAAAGGAGGTAATGGTAGCAGTATAAGCTCTGGTGCTAGGGAAGTCAGAATTCTTGCTGATCTTCCTAATAGgttaaaccttaaaaaaggTGACTCACAAGCCATTTATAACTACCTCTGCCGAATGCAGTTGACTAATCCAAACTTCTTTTACTTAATGGATTTCAATGATGAAGGGCATTTGAGAAATGCACTTTGGGTTGATGCAAGGTCTAGGGCTGCATGTGGTTATTTTGGtgatgttatttattttgacaacacatatttgtcaaataaatatgaaatccCACTTGTCACATTTGTTGGTATGAATCACCATGGCCAGTCAGTGTTGTTGGGTTGTGGTCTTCTTGCAGGTGAAACAATAGAATCTTATGTATGGTTCTTCAGAAAATGGGTTACATGTATGTCTGGATGTAGTCCACATACCATTATCACTGACAGGTGTAGGGTTTTGCAGAGTGCAATCACTGAAGTTTTTCCTAGATCTCATCATTGTTTTGGCTTGTCATTGATCATGAAAAAAGTACCAGAGAAGTTGGGGGGATTGTGTAACTACGATGCAATAAGGAAAGCACTGACTAAAACGGTTTCTGAAACATTGAAAGTGATTGAATTTGAAGCTGCGTGGGGATTTATGGTTCAGCGTTTTGGAGTCAGTGATCACGAGTGGCTTCATTCTCTATATGAAGATCGAGTTCATTGGGCTCCAGTATACTTAAAGGACACATTTTTTGCCGGAATGTCAGCAGCACGTCCTGGTGAGACATTTAGTCCATTTTTTGATAGATATGTGCACAAACAGACTCCTTTAAAGGAGTTTCTTGATAAATATGAATTAGCTCTCCAAAAGAAGTACAAAGAAGAATCTGTCGCAGATATAGAATCAAGAAGCTCAAGTCCCTCGCTGAAAAAAAGATGTTCTTTCGAATTGCGGCTCTCAAAATTGtacacaaaagaaatattcacGAAGTTTCAATTTGAAGTGGAAGAAATGTATTCTTGTTTTAGTACTACTCAATTACATGTAGATGGTCCAGTTATAATATTCTTGGTAAAAGAGCGTGTTTTGAGTGAGGGAAATAGGAGGGAGATTAGggattttgaagttttatacAACAGGACAGCAGGTGAGGTTCGATGCATCTGTAGTTGCTTTAACTTCTATGGATATTTATGTCGGCACGCTTTGTGTGTGCTCAATTTTAATGGGGTGGAGGAGATACCTTCTAAGTACATTCTTTCGCGTTGGAAAAAGGATTACAAGCGTCTACATGTTCCTGATCATTGCTCTGGTGTTGTTGATGGTAGTGATCGTGTTCAATGGTTTAACCAATTATATAGAAGTGCCTTGCAAGTTGTGGAGGAGGGGACAACTTCTCTAGATCATTACAACGTAGCATTGCAAGCTTTTGAGGAATCACTGAGTAGGGTTCATGATGTAGAACAAAGATACGAATA 2003 0.3679 MEEASLCGEQVTDGECDEVQKEDGVLTKLDCQNDFFEGRKEFVAPAVGMEFESYDDAYNYYICYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRVKHVNHLRKETRTGCPAMITMRLVDTQRWRVLEVTLEHNHLLGAKIYKSIKKMGSGAKRKSLSGSHAEVQTVKLYRALVIDKGGNGSSISSGAREVRILADLPNRLNLKKGDSQAIYNYLCRMQLTNPNFFYLMDFNDEGHLRNALWVDARSRAACGYFGDVIYFDNTYLSNKYEIPLVTFVGMNHHGQSVLLGCGLLAGETIESYVWFFRKWVTCMSGCSPHTIITDRCRVLQSAITEVFPRSHHCFGLSLIMKKVPEKLGGLCNYDAIRKALTKTVSETLKVIEFEAAWGFMVQRFGVSDHEWLHSLYEDRVHWAPVYLKDTFFAGMSAARPGETFSPFFDRYVHKQTPLKEFLDKYELALQKKYKEESVADIESRSSSPSLKKRCSFELRLSKLYTKEIFTKFQFEVEEMYSCFSTTQLHVDGPVIIFLVKERVLSEGNRREIRDFEVLYNRTAGEVRCICSCFNFYGYLCRHALCVLNFNGVEEIPSKYILSRWKKDYKRLHVPDHCSGVVDGSDRVQWFNQLYRSALQVVEEGTTSLDHYNVALQAFEESLSRVHDVEQRYE 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03108 667 Pfam SWIM zinc finger 559 581 IPR007527 GO:0008270
Bva06g03108 667 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 19 663 IPR031052 GO:0006355
Bva06g03108 667 ProSiteProfiles Zinc finger SWIM-type profile. 549 585 IPR007527 GO:0008270
Bva06g03108 667 Pfam MULE transposase domain 262 356 IPR018289 -
Bva06g03108 667 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6 19 663 - -
Bva06g03108 667 SMART 26again6 560 587 IPR006564 GO:0008270
Bva06g03108 667 Pfam FAR1 DNA-binding domain 59 142 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03108 Bva-Chr6 19364090 19369523 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva06g03108 MULE 2.4e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03108 - K17604 gmx:100796448 1145.95