Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03080 ATGGCGGCCCTGCCCACTTGCGAAGCTGGGCAACTGGCCCAGTACCTGGGTTCCAATACCACTGATGCCATGGCTGCCGCTAATTTAATCTGCGGCCAATTCTCCGCCGTCTCCAACAGATTCTCCGACACTGCCTTCGCCGTCGACAACACTTATCTTCTATTCTCTGCTTACCTCGTCTTCTCCATGCAGCTTGGCTTCGCCATGCTCTGTGCTGGCTCCGTTCGCGCCAAAAACACTATGAACATCATGTTGACCAACGTGCTTGATGCCGCCGCCGGTGGACTCTTCTACTACCTCTTTGGCTTTGCTTTTGCCTTTGGAGCCCCCTCCAATGGCTTCATCGGCCGCCATTTCTTTGGGCTCAAGGAcattccttcttcttcctttgactACAGCTACTTCCTCTACCAGTGGGCGTTCGCCATCGCCGCCGCCGGCATCACCAGTGGCTCCATCGCCGAGCGAACCCAGTTCGTGGCTTACCTCGTTTACTCGTCTTTCTTAACCGGGTTCGTTTACCCGGTCGTTTCCCACTGGTTCTGGTCTGCTGACGGCTGGGCCAGCGCAACAAACTCGGATCTTTTATTCGGATCCGGAGTCATTGATTTCGCTGGGTCGGGTGTGGTTCATATGGTGGGTGGCATCGCGGGTCTCTGGGGTGCGCTCATCGAAGGGCCCAGAATCGGTCGCTTTGACAATAATGGACGAGGCATCGCTCTCCGAGGACATAGTGCTACTTTGGTTGTCCTGGGAACCTTCTTGCTCTGGTTCGGGTGGTACGGGTTCAACCCGGGTTCGTTTACTAAGATTTTGAGTGCTTACAATTCCGGAAACTACTATGGACAGTGGAGCGCGGTGGGGAGAACCGCCGTGACTACCACCTTGGCCGGTTGCACAGCCGCGTTGACAACACTTTTCGGGAAGAGGATTCTGTCGGGTCATTGGAATGTAACCGATGTATGTAACGGGTTGCTTGGTGGGTTCGCCGCCATCACCGCCGGGTGCTCGGTGGTGGAACCATGGGCAGCGATTATTTGTGGGTTTATAGCGGCAATAGTTTTAATTTGCTGTAATAAGCTGGCGGAGAAGATGAAGTTCGATGACCCATTGGAGGCGGCGCAACTACACGGCGGTTGCGGCGCGTGGGGTATAATCTTCACCGCTCTCTTCGCAAAAGAAGCTTACGTGAACGAAGTATACCCGGGTAAACCGGGACGACCACACGGGTTGTTCATGGGTGGCGGTGGAAAGCTCTTGGGTGCTCATATTATCCAGATTCTGGTGATTATCGGGTGGGTTAGCGCAACCATGGGCCCTCTCTTCTTTATTCTTCACAAGCTGAAACTGTTGCGGATCTCGCCGGAGGACGAAATGGCGGGTATGGATCTGACCCGACACGGGGGGTTTGCATACATGTACGAGGACGAGTCACACAAGCACGGGAttcaattgagaaaaattgaaCCAAACGGTTCCACTCCAACctcaaatta 1496 0.5301 MAALPTCEAGQLAQYLGSNTTDAMAAANLICGQFSAVSNRFSDTAFAVDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGAPSNGFIGRHFFGLKDIPSSSFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLVYSSFLTGFVYPVVSHWFWSADGWASATNSDLLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDNNGRGIALRGHSATLVVLGTFLLWFGWYGFNPGSFTKILSAYNSGNYYGQWSAVGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIICGFIAAIVLICCNKLAEKMKFDDPLEAAQLHGGCGAWGIIFTALFAKEAYVNEVYPGKPGRPHGLFMGGGGKLLGAHIIQILVIIGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYMYEDESHKHGIQLRKIEPNGSTPTSN 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03080 498 PANTHER AMMONIUM TRANSPORTER 6 493 - -
Bva06g03080 498 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bva06g03080 498 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 1 6 493 - -
Bva06g03080 498 Pfam Ammonium Transporter Family 52 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bva06g03080 498 Gene3D Ammonium transporter AmtB like domains 30 491 IPR029020 -
Bva06g03080 498 SUPERFAMILY Ammonium transporter 48 453 - -
Bva06g03080 498 TIGRFAM amt: ammonium transporter 49 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03080 Bva-Chr6 19090830 19092433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g03080 6 496 Inorganic Solute Cotransporters AT4G13510 82.828 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03080 K03320 - sind:105171825 833.172