Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03073 atgagagaagagagagaattttACCTTAAATTTTCCCATCTCCTCCAATCTCAACCAAACAAGATtactttaaagaaaattacattgtGGCACAGTCCATATACATTGTTTCTCCTCTTTTTCTACCAAATTCCCAGTTCGTCACATGCTCTccttttggattttcttttcttcttcactttGTTCTCTCTTCCCCAAGGCACCCGAGGCAGCCTTGAGTTGTCTCAATCAGATTCAgGTTCTATTGCTGAAAATAAGCTTGCTTCAAAGATGGTTCCAGCTGCTGCACCAGCACCCGTagttattaaagaaaattgggtGTCTTGTGATCTTTGTCTGAAATGGCGGCTTTTACCTTTGGATGCAAAGCCAGATCAGCTTCCAGAGAATTGGTCATGCAGTATGCTGTTTTGGGTGCCTGGAATGAACCGATGTGAGATCCCAGAGGAGGAGACAACAAATGTGATGCGTgatttatatcaaattctaATTTCTGAGGGTCAAAGTAACATGCAAAACCGTAAAACTGGAAGTGCAATTGGAGTGAGCTCTGTTGGAGCTGGTTCATGTGTTACTCATGATTCAAATGCAGGTCTTATTGTTCAAAATAAACTTGCTTTGGAGATGGTTCCAACAGGAGCAACAGCACCTTTAGTTATTGAAGAAAATTGGGTGTCTTGTGATCATTGTCTGAAATGGCGGCTTTTACCTTTGAATACAAAGCCAGATCAAGTTCCAAAGAATTGGTCATGCAGCATGCTATATTGGGTGCCTGGAATGAACCGGTGTGAGATCCCAGAGGAGGAGACAACAAATGTGATGCGTTCCTTTTATGAAAGGATGGATCAAAGTGACATGCAAAACCATGCCGCTGGAATTGCAACAGAAGTGAGCTCTGTTGATTCTAGGCCATCTCAGAAAGATGATTCAAATTCTGTTATTATTGCTGAAAATAAACTTGCTTCGGAGGTGGTTCCAGCTGCTGCAGCAGCACCTTTAGTTATTGAAGAAAATTGGGTGTCTTGTGATAGTTGTCTGAAATGGCGGCTTCTACCTTTGGATAAAAAGCCAGATGAGCTTCCAGAGAAATGGTTATGCTGCATGCTATATTGGATGCCTGGGATGAACCGGTGTGAGATTCCGGAGGAGGAGACAACGAACGTGATGCGTTCCTTTTATCAAAGAATTTTATCTGAGCATCAAGTATTCTCTCTGGCTTTGAGCAGATGTGTTAAATTCTCATCGCTTGAGCCGGATTCTGAAGAGTTGAAGGCAGAGTTGCCAGAGAGATTGATGATGGCCTTCATCTG 1310 0.3985 MREEREFYLKFSHLLQSQPNKITLKKITLWHSPYTLFLLFFYQIPSSSHALLLDFLFFFTLFSLPQGTRGSLELSQSDSGSIAENKLASKMVPAAAPAPVVIKENWVSCDLCLKWRLLPLDAKPDQLPENWSCSMLFWVPGMNRCEIPEEETTNVMRDLYQILISEGQSNMQNRKTGSAIGVSSVGAGSCVTHDSNAGLIVQNKLALEMVPTGATAPLVIEENWVSCDHCLKWRLLPLNTKPDQVPKNWSCSMLYWVPGMNRCEIPEEETTNVMRSFYERMDQSDMQNHAAGIATEVSSVDSRPSQKDDSNSVIIAENKLASEVVPAAAAAPLVIEENWVSCDSCLKWRLLPLDKKPDELPEKWLCCMLYWMPGMNRCEIPEEETTNVMRSFYQRILSEHQDVLNSHRLSRILKS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03073 415 ProSiteProfiles Zinc finger CW-type profile. 333 386 IPR011124 GO:0008270
Bva06g03073 415 ProSiteProfiles Zinc finger CW-type profile. 100 153 IPR011124 GO:0008270
Bva06g03073 415 PANTHER CW-TYPE ZINC-FINGER PROTEIN 308 408 - -
Bva06g03073 415 PANTHER CW-TYPE ZINC-FINGER PROTEIN 83 187 - -
Bva06g03073 415 Pfam CW-type Zinc Finger 223 269 IPR011124 GO:0008270
Bva06g03073 415 Pfam CW-type Zinc Finger 338 384 IPR011124 GO:0008270
Bva06g03073 415 Pfam CW-type Zinc Finger 105 151 IPR011124 GO:0008270
Bva06g03073 415 Gene3D - 214 273 - -
Bva06g03073 415 Gene3D - 331 388 - -
Bva06g03073 415 Gene3D - 99 155 - -
Bva06g03073 415 PANTHER CW-TYPE ZINC-FINGER PROTEIN 198 312 - -
Bva06g03073 415 PANTHER CW-TYPE ZINC FINGER 198 312 - -
Bva06g03073 415 ProSiteProfiles Zinc finger CW-type profile. 218 271 IPR011124 GO:0008270
Bva06g03073 415 PANTHER CW-TYPE ZINC FINGER 308 408 - -
Bva06g03073 415 PANTHER CW-TYPE ZINC FINGER 83 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03073 Bva-Chr6 19033178 19035778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g03073 336 415 B3 DNA Binding Superfamily AT4G32010 35.632 6.83e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03073 - - gmx:100810441 134.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02260 12 17260321 17262747 Bva06g03073 06 19033178 19035778 BWGD