Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03065 ATgataaaacttttctttttcttctcccatgCAATGTATTCCTTCTACCATATCTTGTGCTTGCTTTGCTTACTCAATGTTTTAGCTTCGATAGGGAAACACAAACACCCAGTTCTCGTTCATTCAGCCAGTGAAGAGAGGCTCAGTGCTAATTCGATTAACGTCACCAAACACTTCTCCTTCCCTGATTTCAGCCTCAGCAACAACCCCAGAATTATCCATGATGTTAAGCTCCTAGGCAGTGCCAACTTTTCAGAAGAAAAGGGTGCTCTTCAAATTCCCAATGAATCCCAAGTTACAGATATTAGACAGCAAGCAGGAAGAGGCATATATTCTTTCCCAATTCGCTTGCTAGACCCTCAAACCAGAACCCCAGCTTCTTTTGAAACCACTTTCACCTTTCAATTAAACAATTCCACTATCTCTGATCAAAACTATGGTGGTGGTAGTGGCCTGACTTTCATCATCGTCCCTGACGAGTTTACAGTGGGAAGACCAGGGCCATGGCTTGCCATGCTCAATGATGCTTGTGAGGACAACTACAAAGCTGTGGCAATTGAGTTTGATACAAGAATGAATCCTGAATTTGGAGATCCAAATGACAATCATGTGGGCATCAATCTAGGTAGCATAGTATCCACAAAAATCATCAATGTTTCAGATGTGGGTGTTTCCCTTAAGGATGGTTTTGTTCACCGTGCTTGGATTAACTATGATGGTCTTCAGAGAAGAATGGACATTCGTCTCGGAGTAGCTAACCAAGAAGATTACCCTTCTAAGCCCATCTTCTCAGAATCTCTAGATCTCTCGCCCTTCTTGAATGAATACATGTTTGTGGGGTTCTCAGCTTCCACGGGAAACCACACCCAAATCCACAACATACTTTCTTGGAACTTCACTTCTACTAGTCAAGCTTTTCTTCGCTTCCCTTCAGCTGAAACTTGCCAGGGTAAGATCTTTCTTCAAAATGTTTCTTCAGCTCCTACTGAAGCTTCCTCCCCTAAAGCTGAACCCCCGCGCAGCTTCTTGATCTTTGTGGCTGTAGTTGCATTAGCCTTGGCTATTCTTCTTGTCTTTTACTTCAGCAATAAGCGTAAAAAGGTTGCTGCATCAAACATCTTAGCAGAGGGAGAGATCCACAGGCCAAGGCCTCCCAACAAGCCACGCCGATTCacattttctgaaatttcCACTGCAACTCGATCTTTCAGCGAGTTAGAGTTACTGGGCAGGGATTCTAAAGGCGAGTACTATAGAGGAAAGCTTGCTAATGGCTGTCAAGTTGCAGTGAAAAAGTTCTCAGCTCAATTTTTGAGCTCACATGGATCAGATAAAAAGCGattgttgaaagaaattgaTGTTATCAGCAAGGTTCGCCACCCAAATTTGATTCCCATCAGAGGGTGGTGTAAAGACAACCATGAAATCTTGGTGGTCTATGACTTCTTTCCAAATGGAAGCCTTGACAAATGGTTATTTGGAGCTGGCGTTCTTCCATGGACTCGGCGACTCAAGGTTATAAAAGACATAGCTGACGGCTTGAACTGCCTTCACTTAAAGCGGCTAGCTCACAAGAACCTAAAATGTAGCAGCGTGTTTCTTGATGTCAACTTCAGAGCAGTTTTAGGTGATTTTGGAATTGTGCTGTTGGAGGCAGAATCAAAGCAGTTTGAGTCAGCAATATGTCAAGGCGTTGATGTGTTTGAATTTGGTGTCTTTGTGTTGGAAGTGGTGAGTGGAAGAAGGAGGGTAGAGACACAGACAGAACAGGGAAATCCCCAAGAGAGGAACATGCTGGATTTTGCTTGGAGTTTGCAAGAGAATGATGACAAGGTAAAGCTGGTGGATAAAAGAATGGGATCATTGATCAATTTGGAACAGGCAATTCGTGTGCTGGAAATTGGCTTGCTTTGCACACTGAATGAGAACAAAGGGAGGCCTAGCATGGAGCAAGTGGTGGAGCTTCTTAACACGGACAGGCCAGTTCCTGAGCTGCCAAGAACTCGCCCTGTTGCTTTGTTTCCCTATAGCAGCGCCAATACTGGTCTTTGTAACACATACTCCTGTGCTGCATTGAAGCTTTA 2084 0.429 MYSFYHILCLLCLLNVLASIGKHKHPVLVHSASEERLSANSINVTKHFSFPDFSLSNNPRIIHDVKLLGSANFSEEKGALQIPNESQVTDIRQQAGRGIYSFPIRLLDPQTRTPASFETTFTFQLNNSTISDQNYGGGSGLTFIIVPDEFTVGRPGPWLAMLNDACEDNYKAVAIEFDTRMNPEFGDPNDNHVGINLGSIVSTKIINVSDVGVSLKDGFVHRAWINYDGLQRRMDIRLGVANQEDYPSKPIFSESLDLSPFLNEYMFVGFSASTGNHTQIHNILSWNFTSTSQAFLRFPSAETCQGKIFLQNVSSAPTEASSPKAEPPRSFLIFVAVVALALAILLVFYFSNKRKKVAASNILAEGEIHRPRPPNKPRRFTFSEISTATRSFSELELLGRDSKGEYYRGKLANGCQVAVKKFSAQFLSSHGSDKKRLLKEIDVISKVRHPNLIPIRGWCKDNHEILVVYDFFPNGSLDKWLFGAGVLPWTRRLKVIKDIADGLNCLHLKRLAHKNLKCSSVFLDVNFRAVLGDFGIVLLEAESKQFESAICQGVDVFEFGVFVLEVVSGRRRVETQTEQGNPQERNMLDFAWSLQENDDKVKLVDKRMGSLINLEQAIRVLEIGLLCTLNENKGRPSMEQVVELLNTDRPVPELPRTRPVALFPYSSANTGLCNTYSCAALKL 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03065 683 Gene3D Phosphorylase Kinase; domain 1 365 471 - -
Bva06g03065 683 Gene3D Transferase(Phosphotransferase) domain 1 472 651 - -
Bva06g03065 683 SUPERFAMILY Concanavalin A-like lectins/glucanases 47 292 IPR013320 -
Bva06g03065 683 Gene3D - 44 291 - -
Bva06g03065 683 PANTHER - 41 662 - -
Bva06g03065 683 ProSiteProfiles Protein kinase domain profile. 392 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g03065 683 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2-LIKE 41 662 - -
Bva06g03065 683 Pfam Protein tyrosine and serine/threonine kinase 396 538 IPR001245 GO:0004672|GO:0006468
Bva06g03065 683 CDD lectin_legume_LecRK_Arcelin_ConA 47 291 IPR001220 GO:0030246
Bva06g03065 683 Pfam Legume lectin domain 46 293 IPR001220 GO:0030246
Bva06g03065 683 SUPERFAMILY Protein kinase-like (PK-like) 371 645 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03065 Bva-Chr6 18959353 18961786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g03065 47 663 Receptor kinase-like Gene Family AT5G55830 31.818 1.57e-97 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bva06g03065 Lectin_legB 4.5e-56 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03065 - - gmx:100781464 1028.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g03065 06 18959353 18961786 Bva06g03065 06 18959353 18961786 ECH