Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03060 ATGCTCCGAACCCCTCACAGTTACACTGCTCAGCGACGAGCTGACCCCGCTGGTGAAACTTCACGACAGCCCAGATTCCATTTACTAACCAGTGATGCTTTAACTTTCGCTTGGAAGATAAGAAGTTTCGTTGCTGGCATAGCGAAACCCAGTTCTTTACTTGCACAATCAGAAATGACATTTGGCAGTTCTAAGTTAGGTGCTACTTTAGCTCTTCGGTTACCATGTAACCGGGTGGCAGGAATGGGTTtgattacaaaatttcagtATTCTGTTTCTGATAGAACCTCGGCTTCTGTGTCTGTGGGTTCACCTCCTTCTAAGCCACGCTCCACTCGCTTGAACAGGAAGCAGGAGCGTTCCTCCTCCTCATCATTATATAGTCGTCCTAGTTTATTAGATATGAAGAAAGATAAGATAGCCAATCGTGCTAAGgtttatgaatttttgagGGGAATTGGTATTGTTCCCGATGATCTTGATGGTTTGGAACTTCCAGTAACAGTTGAGGTTATGAGGGAACGGGTAGATTTTCTTCACAATTTAGGGCTTACAATAGAAGATATTAACAACTATCCACTTGTTCTTGGCTGCAGTGTCAAGAAGAATATGATTCCTGTGCTTGATTACCTTGGTAAAATGGGTGTCAGGAAATCTACATTCACGCAGTTCTTGAGGAGGTACCCACAAGTCCTTCATGCTAGTGTTGTTATTGACCTTCAACCCGTGGTCAAGTATCTTCAGGGGATGGATATAAAACCCAATGATATTCCTCGGGTACTTGAGAAGTACCCAGAAGTGCTTGGATTCAAGCTTGAGGGAACCATGAGCACATCGGTTGCTTATTTAGTTGGAATTGGTGTAGCAAGAAGAGAAATTGGAGGGGTTTTGAGTAGATATCCTGAGATTTTGGGAATGCGAGTTGGTAAAGTGATCAAACCTTTTGTGGAATATCTGGAAAGCTTGGGATTGCCAAGATTAGCCATTGCTAGACTAATAGAGAAACGACCTCATATTCTTGGCTTTGGATTGAACGATAAggtaaagccaaatgtcgaatCCCTTGAAGAGTTTAATGTTAGAAGAATGTTTGTTCCCTCTGTAATTGCTCAGTATCCCGAGATCATTGGAATTGACTTAAAACCTAAGCTCGTCAATCAAAGGAGTTTACTCAATTCTGCACTTGATATGGATCCTGAGGATTTTGGCAGAGTTGTTGAGAAGATGCCTCAGGTAGTTAGCCTCAGCAGTGCACCTATGCTGAGGCATGttgattttcttaaaacttGTGGATTTTCCTTGCCACAAATGAGAGAGATGGTTGTTGGTTGCCCACAACTACTTGCTTTAAATATTGACATCATGAAGCTTAGCTTTGGTTACTTacaaatggaaatgaaaaggCCTTTGGAAGATTTGGTTGCTTTCCCTGCATTCTTCACGTACGGCTTGGAGTCAACTGTAAAACCAAGGCATAAGATGGTTTCCAAGAAGGGTTTGAAATGTTCTCTTTCATGGATGCTTAATTGTTCTGATGAGAAGTTTGAGCAACGAATGAGTTATGACACGATTGACATGGAGGAGATGGAAACGGGGCCATCATTCGACATGAATTCACTGATGGAACCAAGGAGTGATGAGTCAGATTCTGATTATGAAGACAGTGATGATGAGGATGAATATATAGGATG 1691 0.4033 MLRTPHSYTAQRRADPAGETSRQPRFHLLTSDALTFAWKIRSFVAGIAKPSSLLAQSEMTFGSSKLGATLALRLPCNRVAGMGLITKFQYSVSDRTSASVSVGSPPSKPRSTRLNRKQERSSSSSLYSRPSLLDMKKDKIANRAKVYEFLRGIGIVPDDLDGLELPVTVEVMRERVDFLHNLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKMGVRKSTFTQFLRRYPQVLHASVVIDLQPVVKYLQGMDIKPNDIPRVLEKYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLSRYPEILGMRVGKVIKPFVEYLESLGLPRLAIARLIEKRPHILGFGLNDKVKPNVESLEEFNVRRMFVPSVIAQYPEIIGIDLKPKLVNQRSLLNSALDMDPEDFGRVVEKMPQVVSLSSAPMLRHVDFLKTCGFSLPQMREMVVGCPQLLALNIDIMKLSFGYLQMEMKRPLEDLVAFPAFFTYGLESTVKPRHKMVSKKGLKCSLSWMLNCSDEKFEQRMSYDTIDMEEMETGPSFDMNSLMEPRSDESDSDYEDSDDEDEYIG 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03060 563 MobiDBLite consensus disorder prediction 97 127 - -
Bva06g03060 563 MobiDBLite consensus disorder prediction 97 111 - -
Bva06g03060 563 PANTHER CGI-12 PROTEIN-RELATED 100 549 IPR003690 GO:0003690|GO:0006355
Bva06g03060 563 Gene3D Transcription termination factor 3, mitochondrial 170 310 IPR038538 -
Bva06g03060 563 Gene3D Transcription termination factor 3, mitochondrial 311 525 IPR038538 -
Bva06g03060 563 SMART mt_12 438 469 IPR003690 GO:0003690|GO:0006355
Bva06g03060 563 SMART mt_12 366 398 IPR003690 GO:0003690|GO:0006355
Bva06g03060 563 SMART mt_12 403 433 IPR003690 GO:0003690|GO:0006355
Bva06g03060 563 SMART mt_12 186 217 IPR003690 GO:0003690|GO:0006355
Bva06g03060 563 SMART mt_12 258 289 IPR003690 GO:0003690|GO:0006355
Bva06g03060 563 SMART mt_12 330 361 IPR003690 GO:0003690|GO:0006355
Bva06g03060 563 SMART mt_12 222 253 IPR003690 GO:0003690|GO:0006355
Bva06g03060 563 SMART mt_12 294 325 IPR003690 GO:0003690|GO:0006355
Bva06g03060 563 SMART mt_12 470 501 IPR003690 GO:0003690|GO:0006355
Bva06g03060 563 SMART mt_12 123 156 IPR003690 GO:0003690|GO:0006355
Bva06g03060 563 MobiDBLite consensus disorder prediction 1 22 - -
Bva06g03060 563 MobiDBLite consensus disorder prediction 547 563 - -
Bva06g03060 563 MobiDBLite consensus disorder prediction 531 563 - -
Bva06g03060 563 Pfam mTERF 208 516 IPR003690 GO:0003690|GO:0006355
Bva06g03060 563 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF4, CHLOROPLASTIC 100 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03060 Bva-Chr6 18941751 18943641 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva06g03060 mTERF 6e-108 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03060 K15032 - tcc:108660473 786.178