Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03059 ATGGGAGCGTGCGACTATCTTCCCCCTCGTGCGGAAGAGGTGGCTATGTTGTCTCTAAATTCTTTGCCTCTGGGGTTCCGATTCCGGCCCACGGATGAGGAACTCATTGATTACTACTTGCGAGAAAAGATCAACGGGAACGACGACGAAGTTAGGGTTATTCGGGAAATTGATGTCTGCAAATGGGAGCCGTGGGATTTACCAGATTTGTCGGTGGTACAGTCCAAAGATCCAGAGTGGTTCTTTTTCTGTCCGCAGGACCGGAAGAGGACCTATTGGGTTATGCATGAGTACCGTCCAACTTTGAAGGAGCTGGATGGCACCAATCCTGGACAGAATGCATTTGTCCTTTGTCGGTTATTTAGGAAACAGGATGAAACTCTTGAAGGTTCAAATTGTGATGAAGTGGAGCAAACTGTGTTAACTCCAATTGCTGCTAAAAATTCGCCAGAAGATCTAGCTACGATTGCAGTATCCCCCCCATCACAGGTAACTGAAGATCGTAAGCACCATGGAGTCCTGTCGTCTATCACTGAGAACTCTGAAGAAGCAACATCCAATGTCATAACACCGACTGATTGCCAGAGTGATGGATGTGATGCTGATTATGCCCAACATCCGATGACACAACCAATAGCTACAGAGGTTAATCCACTGGAGAGCTTAGGCATTTTTCTCAACCCAATTGGCGAGACGTTGGATGACAAACTTTTTTCCCCAGTACACATGCATATGCCGCAACACATGTATTTCCAAGTAAATAATGAAGCAGAGTATGGTACAAATGGGGAAAATTTTGCAGAGTTATTGGACTCAGTCGTTAATTGGGGTGATTTCTCATGTGACTTGTCGAGCTCTCAGAAAACCCAAACCATTTCTTGTGGTAAAGACAATGGATCAGGCAGTGACTCGGAGGTGGAAATGGCCAGTGTACCATTTACGCCAAGTTTGCAAACTGGATGGCCTGAGGTAAACATTGACAGGAAGCATCCCTTTATCGGGGCAGCTCCAGAAGTTTACAGCACCATCACCTCGGATCTTAGTGGAAATCAGCAGAAGAGTAATATGGGATTATTGCAAAACAATTCCCAGATGGCTTCCTTACCTGATGTTGCTGGCCAAGTATACAATGTGTTTAATGGTTATATGGAATCAGGAAATTACAATGCTGTTGCTAGTAGTGATAATGGTACTGGAATCAAGATAATGACTCGCCAATTACGAAATGAACTTCCTAACATGAATCCTCTGAACCAAGGTACTGCCGCAAGAAGGATACTCCTGCAATGCAAGTCACATAGTGTGtttacaaaaccaaaagagaGCCGCAAACCAGAAGAGGAGGATTCAAAACCTGTCATTGCAGGGGGGAGGAAAGTTTCAGAAAATCATGCTGCTGCAGATGAGAGTGTTGCTGATACCAAGGTTGTGAATGAACCCCAGAAGACATCTCTTGACGCAGCTGACAATAGTAAGATTTATCAGCAACATGATACAAAGGCGAATTCCATCTCGGAGTTGAAAGAGGCTTTATTGTTTGAAGGGGTTCCTGTGAAATCAAAGCCTTGCGTTAGCCGCAAAATCCTGTCATCTGTTGTATTTATTTTCGTGGTCGTGGTGTTAATAGTGTTCTTTGCTAACATATGggaatatcttaaattttg 1664 0.4351 MGACDYLPPRAEEVAMLSLNSLPLGFRFRPTDEELIDYYLREKINGNDDEVRVIREIDVCKWEPWDLPDLSVVQSKDPEWFFFCPQDRKRTYWVMHEYRPTLKELDGTNPGQNAFVLCRLFRKQDETLEGSNCDEVEQTVLTPIAAKNSPEDLATIAVSPPSQVTEDRKHHGVLSSITENSEEATSNVITPTDCQSDGCDADYAQHPMTQPIATEVNPLESLGIFLNPIGETLDDKLFSPVHMHMPQHMYFQVNNEAEYGTNGENFAELLDSVVNWGDFSCDLSSSQKTQTISCGKDNGSGSDSEVEMASVPFTPSLQTGWPEVNIDRKHPFIGAAPEVYSTITSDLSGNQQKSNMGLLQNNSQMASLPDVAGQVYNVFNGYMESGNYNAVASSDNGTGIKIMTRQLRNELPNMNPLNQGTAARRILLQCKSHSVFTKPKESRKPEEEDSKPVIAGGRKVSENHAAADESVADTKVVNEPQKTSLDAADNSKIYQQHDTKANSISELKEALLFEGVPVKSKPCVSRKILSSVVFIFVVVVLIVFFANIWEYLKF 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03059 554 MobiDBLite consensus disorder prediction 435 475 - -
Bva06g03059 554 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 89 414 - -
Bva06g03059 554 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 17 89 - -
Bva06g03059 554 Gene3D NAC domain 31 89 IPR036093 GO:0003677|GO:0006355
Bva06g03059 554 Pfam No apical meristem (NAM) protein 23 90 IPR003441 GO:0003677|GO:0006355
Bva06g03059 554 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 89 414 - -
Bva06g03059 554 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 17 89 - -
Bva06g03059 554 SUPERFAMILY NAC domain 16 123 IPR036093 GO:0003677|GO:0006355
Bva06g03059 554 ProSiteProfiles NAC domain profile. 22 180 IPR003441 GO:0003677|GO:0006355
Bva06g03059 554 Gene3D NAC domain 90 128 IPR036093 GO:0003677|GO:0006355
Bva06g03059 554 MobiDBLite consensus disorder prediction 436 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03059 Bva-Chr6 18935673 18939178 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g03059 14 434 NAC Transcription Factor Family AT4G35580 31.579 3.79e-55 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva06g03059 NAM 2.3e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03059 - - gmx:100778903 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01867 12 15089738 15093229 Bva06g03059 06 18935673 18939178 ECH
Bva06g03059 06 18935673 18939178 Bva06g03059 06 18935673 18939178 ECH