LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva06g03044	ATGTTTCTGCCAAGGAGAAGCAACAATGGAACGttctttattttgcattttattcttttggttctGCACCAAAAGTATATCTTGCCTGCTGCTGCCGCCTCTGCCAGAAGCAATGTTTACATTGTTTACATGGGGAAAAAACAACACGACGATCTAGAGCGCCTCACTGAATTCCACTTTGAAACTCTTGCATCAGTCCTGGGAAGAGAACAAGCTGCAGGCTCCATGGTGTATAGCTACAAGCATGGATTCTCTGGTTTTGCTGCGAGGCTGACAAAAACCCAAGCTCAAACGGTTGCAGAGTTACCTGATGTTGTTCAAGTCATTCCCAATCATCTTTATAAAATGCAAACTACCAGAAGCTGGGACTATCTTCAACTGCCTCTACAATCTTCCAACAGTCTTCTGCATCAAGCCAAGATGGGTGATGGGGTCATCATTGGTGTTCTAGATTCAGGGATATGGCCAGAATCTAAAGTTTTCACAGACCAAGGTTTAGGGCCGATCCCCTCTAGGTGGAGGGGAGGTTGTGAATCAGGAGAGCTCTTTGATGCAGCAAAGAACTGTAACAGAAAACTAATCGGAGCTCGTTACTTCATCAAGGGGATTCAAGCTGAGTATGGACAGCCATTCAATTCTATCACACTCGAAGAGTACTTGTCCCCAAGAGATGCATCTGGACATGGCACACACACCTCTACAACAGCTGCTGGCTCCCTTACCAGTGATGCAAGCTACGATGGACTAGCTTTCGGAACAGTGCGAGGTGGTGCCCCACGGGCTCGACTAGCCATGTATAAAGTCTGCTGGAGCTTGTCCATTGGAGGAGTATGTGCAGCAGCTGACATACTGAAAGCCTTTGACAAAGCAGTACATGATGGTGTAGATGTATTATCAGTGTCCATTGGTTCTGATCTTCCATTGTATTCTGACATAGACGTGCGTAACGGAATCAGCTTAGGAGCTTTTCACGCTGCTGCAAATGGAATTAGCGTTATCTGTTCCGCAGGAAATAATGGTCCATATGCTCAAACAGTGCAAAGCCCATCACCATGGATACTTACCGTGGCAGCAAGTACCATAGACCGCTCTTTCCCTACGCCTATCACACTAGGAAACAACTGGACATCAATGGGTCAAGGCATGTATACAGGGAAGGATACAGGGTTCACCACTCTGGTGTACCCTGAGACACCAGAAATCCTAGATCCTCGCAATTGCGAATCTCTCTCAGCAAATGACACATGGGTAAAAGGAAACGTCGTTCTTTGCTTTGTCTTCAATTCTCAAGAGTTTGCAACAGAGGACGCCGCATGGTCTGCCAGGGAAGCAGGTGCTTTAGGGGTTATTGTTGCTAAAAATCCCAGTAAATCAGCTGAACAATGTGACTACAATTTCCCATGTGTCCTAGTAAGCCTTGAAACTGGAATGCAGATACTCTACTACATCCGTTCTACCAAGCATCCCAGCATAAAGATTGGCCCTTCCAAAACATATACTGGTAAACCTGTGTCAACCACCATTGCACGTTTCTCATCTAGAGGGCCTAGTCCCCTTGCCCCTGAAATACTGAAGCCAGATATAGCGGCTCCAGGCGTCAATATTCTAGCAGCAGTCTCTCCTGGTGATTCCTCACGAGATACTGTGTTCGCTCTTAAGTCTGGAACTTCAATGGCAACACCTCATGTCTCAGGCATTGTCGCACTACTCAAATCACTGCACCCAAATTGGTCACCTGCCGCTCTCAAATCAGCTATATTAACCACAGCATGGACAACCGATCCATATGGGCGACCAGTGTTTGCAGAGGGAGATCCAACCAAGCTTGCAAATGCATTTGATTTTGGAGGTGGAATCGTGAACCCAAATAAAGCAGCAGATCCTGGTCTTGTTTATGACATGGATATATCAGATTACGTCCATTATCTATGTGCCATGAGCTATAACAACTCCATCATTTCTCAGATTACGGGACATCCCACATTCTGCACAAGTAAACAACACTCTCTGCTAGATGTAAACCTTCCTTCCATAGTCATCCCTTCCCTTAGAAGCACAACAATCTTAACTAGGACTGTCACAAATGTTGGACCCGTTAATTCAAAGTACAAGGCCATTGTTGAGTCTCCCATTGGTATAACCATAGACGTAAGGCCTGATACATTAATATTCAACTCTACAACACAGACCATATCCTTCACCGTTGTTGTTTCCTCCAGTCAACAAGTGAGCTCAGAATACTTGTTTGGTTCCTTGACTTGGAATGATGGGGTGCACACAGTCACAAGTCCAATATGCGTGAGAACTGAGATGACAGAGTCGTATGGTTA	2330	0.4511	MFLPRRSNNGTFFILHFILLVLHQKYILPAAAASARSNVYIVYMGKKQHDDLERLTEFHFETLASVLGREQAAGSMVYSYKHGFSGFAARLTKTQAQTVAELPDVVQVIPNHLYKMQTTRSWDYLQLPLQSSNSLLHQAKMGDGVIIGVLDSGIWPESKVFTDQGLGPIPSRWRGGCESGELFDAAKNCNRKLIGARYFIKGIQAEYGQPFNSITLEEYLSPRDASGHGTHTSTTAAGSLTSDASYDGLAFGTVRGGAPRARLAMYKVCWSLSIGGVCAAADILKAFDKAVHDGVDVLSVSIGSDLPLYSDIDVRNGISLGAFHAAANGISVICSAGNNGPYAQTVQSPSPWILTVAASTIDRSFPTPITLGNNWTSMGQGMYTGKDTGFTTLVYPETPEILDPRNCESLSANDTWVKGNVVLCFVFNSQEFATEDAAWSAREAGALGVIVAKNPSKSAEQCDYNFPCVLVSLETGMQILYYIRSTKHPSIKIGPSKTYTGKPVSTTIARFSSRGPSPLAPEILKPDIAAPGVNILAAVSPGDSSRDTVFALKSGTSMATPHVSGIVALLKSLHPNWSPAALKSAILTTAWTTDPYGRPVFAEGDPTKLANAFDFGGGIVNPNKAADPGLVYDMDISDYVHYLCAMSYNNSIISQITGHPTFCTSKQHSLLDVNLPSIVIPSLRSTTILTRTVTNVGPVNSKYKAIVESPIGITIDVRPDTLIFNSTTQTISFTVVVSSSQQVSSEYLFGSLTWNDGVHTVTSPICVRTEMTESYG	776

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva06g03044	776	Pfam	PA domain	393	479	IPR003137	-
	Bva06g03044	776	Pfam	Fibronectin type-III domain	672	767	IPR041469	-
	Bva06g03044	776	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	28	117	IPR037045	-
	Bva06g03044	776	Pfam	Subtilase family	142	594	IPR000209	GO:0006508\|GO:0008236
	Bva06g03044	776	Pfam	Peptidase inhibitor I9	39	116	IPR010259	-
	Bva06g03044	776	Gene3D	-	643	770	-	-
	Bva06g03044	776	Gene3D	Peptidase S8/S53 domain	144	639	IPR036852	GO:0004252\|GO:0006508
	Bva06g03044	776	ProSiteProfiles	Serine proteases, subtilase domain profile.	121	626	-	-
	Bva06g03044	776	CDD	PA_subtilisin_like	369	493	-	-
	Bva06g03044	776	Gene3D	-	362	500	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva06g03044	Bva-Chr6	18867928	18871606	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva06g03044	15	775	Subtilisin-like Serine Gene Family	AT4G10540	55.208	0.0	859

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva06g03044	-		-	qsu:112022505	1025

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva06g03044	06	18867928	18871606	Bva06g03044	06	18867928	18871606	ECH

Showing 1 to 1 of 1 entries