Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03023 ATGGGCCATTGCTGCAGCAAAAACGTTTCTGCAGTCGATAATGAAACGGTCACCGCCGATCACGGCAGTAAACCTCCACATCCGACAGCATCGCCACTCCCTTCATGCAACGGAACCAGTAGCCACGGCGATGCAACCCCTGGCAGGAATACTCCCGCCAACTCCTTCTCCACCAGTCCATTCACGAGTCCTTTGCCTCCTGGAGTGGCGCCGTCGCCGGCGAGAACTCCTGGTCGGAAATTTCGATGGCCTCTTCCGCCTCCATCGCCGGCGAAGCCGATCATGGCGGCAATACTAAGGCGACAGGGGAAGTCGAAGCCCAAGGAGGGGCCGATACCAGAGGAGGGGCAAGGTGAAGAGGCAGAGAGGTCGCTGGATAAGAGCTTTGGATATGCGAAGAATTTTGGGGCGAAATACGAGCTGGGGAAAGAAGTGGGTCGAGGACATTTTGGTCATACTTGCCGTGCCAGAGCAAAGAAGGGAGAGCTTAAGGGACAGGAGGTAGCTGTGAAAATCATATCGAAAGCTAAGATGACAACAACAATAGCTATTGAAGATGTACGGAGGgaggtgaaaatattgaaagcCTTATCTGGACATACGAATTtagtcaagtttcatgatgcATTTGAGGATGCCAATAATGTTTACATAGTAATGGAATTGTGTGAGGGTGGAGAACTACTTGACAGAATTCTCTCAAGAGGTGGAAGATACACAGAGGATGATGCTAAATCTATTGTTGCACAAATTCTAGATGTAGTTGCCTTTTGTCATCTTCAAGGAGTTGTTCATCGTGATTTAAAACCAGAGaactttctttttgtcGCAAAAGATGGGGATTCTCCAATGAAGGTTATTGATTTTGGTCTATCTGATTTTGTTAGGCCAGATCAACGCCTGAATGATATTGTTGGCAGTGCATACTATGTTGCACCTGAGGTGCTCCATAGATCTTACAGTGTTGAAGCTGACTTGTGGAGTATTGGAGTTATAACTTACATATTGTTATGTGGAAGCAGACCATTCTGGGCACGTACTGAATCTGGAATCTTTCGATCTGTGTTGAGAGCTAATCCAAACTTTGATGATTCACCTTGGCCATCAGTTTCACCTGAAGCTAAAGACTTTGTAAAACGACTTTTGAACAAAGACCTCAGGAAAAGGATGACTGCTGCCCAAGCTCTTACTCACCCATGGTTGAGAAACGAAGAACGTGCTATTCCCTTggacattttcatttataagtCAGTCAAGTCATATGTCCGTGCCACACCTCTGAGACGTGCAGCACTGAAGGCTCTCTCAAAAACTTTGACAGAAGATGAGCTTATTTACCTCAGAGCACAGTTTGACCTCTTGGAACCTAAAAATGGCTATCTTTcccttgaaaattttagatcGGCTCTCATGAAACAAGCAACTGATACAATGAAGCAATCAAGGGTccctgaaattttaaatttgATGGAGGCGctctctcataaaaaaatggacTTTGAAGAGTTTTGTGCTGCTGCAATCAGTGTATACCAGCTCGAGGCGCATGAAGAATGGGAGAAAATTGCAACCACAGCTTTTGAGTATTTTGAACGGGATGGAAACAGAGCGATTTCAGTTGAGGAGTTGGCACAGGAGATGAATCTGGGTCCCACAGCTTTCTCTATACTGGGCGACTGGATCAGAAAATCTGATGGAAAACTCAGCTTCGTTGGATACACAAAGTATTTGCATGGGGTCACAATTCGTAATTCAAACACAAGACATCGACAGCCAGCATA 1781 0.4301 MGHCCSKNVSAVDNETVTADHGSKPPHPTASPLPSCNGTSSHGDATPGRNTPANSFSTSPFTSPLPPGVAPSPARTPGRKFRWPLPPPSPAKPIMAAILRRQGKSKPKEGPIPEEGQGEEAERSLDKSFGYAKNFGAKYELGKEVGRGHFGHTCRARAKKGELKGQEVAVKIISKAKMTTTIAIEDVRREVKILKALSGHTNLVKFHDAFEDANNVYIVMELCEGGELLDRILSRGGRYTEDDAKSIVAQILDVVAFCHLQGVVHRDLKPENFLFVAKDGDSPMKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYSVEADLWSIGVITYILLCGSRPFWARTESGIFRSVLRANPNFDDSPWPSVSPEAKDFVKRLLNKDLRKRMTAAQALTHPWLRNEERAIPLDIFIYKSVKSYVRATPLRRAALKALSKTLTEDELIYLRAQFDLLEPKNGYLSLENFRSALMKQATDTMKQSRVPEILNLMEALSHKKMDFEEFCAAAISVYQLEAHEEWEKIATTAFEYFERDGNRAISVEELAQEMNLGPTAFSILGDWIRKSDGKLSFVGYTKYLHGVTIRNSNTRHRQPA 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03023 593 MobiDBLite consensus disorder prediction 102 124 - -
Bva06g03023 593 CDD STKc_CAMK 138 400 - -
Bva06g03023 593 SMART serkin_6 139 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g03023 593 ProSiteProfiles Protein kinase domain profile. 139 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g03023 593 Gene3D Transferase(Phosphotransferase) domain 1 228 416 - -
Bva06g03023 593 SUPERFAMILY Protein kinase-like (PK-like) 138 423 IPR011009 -
Bva06g03023 593 Gene3D - 417 570 - -
Bva06g03023 593 Gene3D - 440 508 - -
Bva06g03023 593 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Bva06g03023 593 Gene3D Phosphorylase Kinase; domain 1 132 227 - -
Bva06g03023 593 PANTHER SERINE/THREONINE-PROTEIN KINASE 50 584 - -
Bva06g03023 593 MobiDBLite consensus disorder prediction 15 124 - -
Bva06g03023 593 PANTHER CDPK-RELATED KINASE 3-LIKE ISOFORM X1 50 584 - -
Bva06g03023 593 SUPERFAMILY EF-hand 433 579 IPR011992 -
Bva06g03023 593 MobiDBLite consensus disorder prediction 33 63 - -
Bva06g03023 593 ProSitePatterns Protein kinases ATP-binding region signature. 145 171 IPR017441 GO:0005524
Bva06g03023 593 Pfam Protein kinase domain 139 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03023 Bva-Chr6 18771766 18777699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g03023 1 584 EF-hand Containing Proteins AT3G50530 57.524 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bva06g03023 Pkinase 8.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03023 - - gmx:100803631 971.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01898 12 15226682 15232380 Bva06g03023 06 18771766 18777699 ECH
Bva06g03023 06 18771766 18777699 Bva06g03023 06 18771766 18777699 ECH