Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03012 ATGGGGGGTTCATCAGAGACGAAATTCCTGCAAGAGTTGATATTATACGCAGCGAGCGCGGCTCTAAGTTGCCTGGTATTGTTTGCGGGGCTCCGACACCTCGACCCGAACCGTGAGGCATCAAAGAAGGCCCTAGAGCACAAGAAAGAGATTGCCAAACGATTGGGTCGTCCTCTGATTCAAACAAACCCCTACGAGGATGTTATAGCATGTGATGTTATAAACCCTGACCACATTGACGTGGAGTTTGAGTCTATTGGGGGACTGGAGACAATCAAGCAAGCATTGTATGAGCTTGTTATACTACCTCTAAAAAGGCCTGATCTGTTTTCACACGGTAAGCTTCTTGGGCCACAAAAGGGTGTCCTGTTGTATGGACCACCTGGTACGGGGAAAACCATGCTTGCCAAAGCTATTGCCAAGGAGTCTGGAGCGGTTTTTATTAATGTGCGGGTATCCAACCTGATGAGCAAATGGTTTGGTGATGCTCAAAAACTTGTGTCTGCTGTATTTAGCCTGGCTTATAAGCTCCAGCCTGCCATTATATTCATTGATGAAGTTGACAGCTTTTTGGGTCAGCGTCGCACATCAGATCATGAGGCACTATTAAACATGAAAACTGAGTTCATGGCTTTATGGGATGGATTTACGACAGATAAGAATGCTCGAGTTATGGTCCTTACTGCAACTAATCGCCCTTCAGAACTTGATGAAGCAATACTTCGGCGTCTTCCTCAAGCCTTTGAAATTGGCATGCCAGACCGAAGGGAGAGGGCTGAAATATTAAAGGTTATCTTAAAGGGTGAGAGGATTGAAGATAACATTGACTTTGATCGTTTAGCTGGCTTGTCTGAGGGTTATACTGGTTCAGATCTATTTGAACTCTGCAAGAAGGCTGCATATTTTCCTATTAGGGAACTGTTGGATGAAGAGAAGAAGGGGAATCGGTCTACTGCACCAAGGCCATTGTCACAGTCAGATTTGGAGAAGGTCCTTTCCACTTCACAGAAAACAAATGTTGCTGCGAGTGAATACACTGGATTAAACGGGCAATCCCCAAGTTGGACAGTGCACAGGGACTCGGGTGATTATCAGTTTCAAGCTGCAATCAACGAACTTTCTAAGCTTGTGGTTTCTCAAATTATTAACCTCCAACCAGATGCCCAGGATCCTTA 1175 0.4519 MGGSSETKFLQELILYAASAALSCLVLFAGLRHLDPNREASKKALEHKKEIAKRLGRPLIQTNPYEDVIACDVINPDHIDVEFESIGGLETIKQALYELVILPLKRPDLFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHEALLNMKTEFMALWDGFTTDKNARVMVLTATNRPSELDEAILRRLPQAFEIGMPDRRERAEILKVILKGERIEDNIDFDRLAGLSEGYTGSDLFELCKKAAYFPIRELLDEEKKGNRSTAPRPLSQSDLEKVLSTSQKTNVAASEYTGLNGQSPSWTVHRDSGDYQFQAAINELSKLVVSQIINLQPDAQDP 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03012 391 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-LIKE 3 378 - -
Bva06g03012 391 CDD AAA 87 251 - -
Bva06g03012 391 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 327 IPR027417 -
Bva06g03012 391 Pfam ATPase family associated with various cellular activities (AAA) 122 251 IPR003959 GO:0005524|GO:0016887
Bva06g03012 391 SMART AAA_5 118 258 IPR003593 -
Bva06g03012 391 Pfam AAA+ lid domain 274 310 IPR041569 -
Bva06g03012 391 ProSitePatterns AAA-protein family signature. 224 243 IPR003960 GO:0005524|GO:0016887
Bva06g03012 391 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 3 378 - -
Bva06g03012 391 Gene3D - 253 335 - -
Bva06g03012 391 Gene3D - 80 338 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03012 Bva-Chr6 18727016 18731111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g03012 81 316 Calmodulin-binding Proteins AT3G56690 34.298 2.64e-37 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03012 K22530 - gmx:100796908 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01910 12 15279141 15283713 Bva06g03012 06 18727016 18731111 ECH
Bva06g03012 06 18727016 18731111 Bva06g03012 06 18727016 18731111 ECH