Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03011 ATGACCTGGGCTACCTCCATCtcctctgttttcttcttcgttcttgtctttcttctgATAATTCGTTTCTTCCGCAAGACTTCTATACTTAACATCCTTAAAAAATGGTGGGTTTCCTTTGAAAACCTCTTTCATGTCTACCAGTCTTTCAAAATCCCAATTCATAACGAGTATTTCCAGGAAAACCAACTTTACCGGAAAATTCTCATTTACCTCAATTCACTGCCCTCAGTAGAGGACTCTGATTTTACAAACCTATTCTCTGGTTCGAAACCGAGTGAAATTTTCCTTCGTCTGGATTCCAACCAAACGGTGCACGACACTTTTCTCAGTGCGAAGGTTTCCTGGACGAACGAAAAAACCGAAGATGGGAAATCAGCTCTAATACTGAGAatcaagaagaaagacaagCGCAGAATTTTCCGTCAGTACTTCCAGCATATTTTATCAGTGGTGGAGGAGATTgaacaaaggaaaaaggagaTTAAGCTGTATATAAATTCAGGAAACCACGAAAATTCGCGGTGGCGGTCGGTGCCGTTCACGCATCCGGCGAGCTTTGACACGTTGGCGATGGACTCTGAGCTGAAGAACAAGGTCAAATCCGATCTCGAGCAGTTTTTGAAGTCTAAGCAGTACTATCACCGATTAGGCCGTGTTTGGAAACGGAACTATCTTCTCTACGGTACGTCCGGTACAGGAAAGTCCAGTTTCATCGCGGCGATGGCGAGGCTCCTTTGTTACGACGTTTACGATGTCGATATTTCCAAGGTTTCGGACGACTCTGATTTGAAGATGCTGTTGATGCAGACAACGAGCAGGTCACTCGTCGTGATCGAGGACCTCGATCGATTCCTCGCCGGGAGATCAACGGCCGTGAGTTTATCAGGCGTATTGAACTTCATGGACGGGATTGTGTCGTGTTGCGGCGAAGAGCGCGTGATGGTTTTCACGATGAACAGCAAAGATCAGATTGATCAAACGGTGATGAGGCCCGGGAGGATTGACGTTCACATACAGTTCCCCTTATGTGATTTCTCCACCTTCAAGATTATGGCCAACAGTTATTTGGGGGTCAAAGACCACAAGCTTTTCCCTCAAGTGGAGGAGGTTTTCCAGACCGGAGCCAAGCTCAGCCCGGCCGAGATTGGCGAGATTATGATCTCGAACCGGAGCTCACCGAGCCGGGCCTTCAAAACCGTCATCACGGCATTGCAAACCAACGGCGGCGATGCGAGGAGGGGTCAAAGAATGGGCGAAAGCGGTTCGGGTCCGATAAGCGAGGAGTTGGGCGAACCGGGCGGAGTGATTTGTAGAGAGAGCGTTCACACGGTGAGGGAGTTCAGAAAGTTATATGGGCTTTTAAGGTTAGGAAGTAGAAGGAAACAGGAGTCCACAAATTCGGGGCCCATAGATAAAGAAGGTCCACGAATTGAAAGTATAAATACTTG 1451 0.4549 MTWATSISSVFFFVLVFLLIIRFFRKTSILNILKKWWVSFENLFHVYQSFKIPIHNEYFQENQLYRKILIYLNSLPSVEDSDFTNLFSGSKPSEIFLRLDSNQTVHDTFLSAKVSWTNEKTEDGKSALILRIKKKDKRRIFRQYFQHILSVVEEIEQRKKEIKLYINSGNHENSRWRSVPFTHPASFDTLAMDSELKNKVKSDLEQFLKSKQYYHRLGRVWKRNYLLYGTSGTGKSSFIAAMARLLCYDVYDVDISKVSDDSDLKMLLMQTTSRSLVVIEDLDRFLAGRSTAVSLSGVLNFMDGIVSCCGEERVMVFTMNSKDQIDQTVMRPGRIDVHIQFPLCDFSTFKIMANSYLGVKDHKLFPQVEEVFQTGAKLSPAEIGEIMISNRSSPSRAFKTVITALQTNGGDARRGQRMGESGSGPISEELGEPGGVICRESVHTVREFRKLYGLLRLGSRRKQESTNSGPIDKEGPRIESINT 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03011 483 MobiDBLite consensus disorder prediction 409 432 - -
Bva06g03011 483 Gene3D - 177 343 IPR027417 -
Bva06g03011 483 SMART AAA_5 221 345 IPR003593 -
Bva06g03011 483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 404 IPR027417 -
Bva06g03011 483 Pfam Domain associated at C-terminal with AAA 28 118 IPR025753 -
Bva06g03011 483 Pfam ATPase family associated with various cellular activities (AAA) 226 343 IPR003959 GO:0005524|GO:0016887
Bva06g03011 483 MobiDBLite consensus disorder prediction 461 483 - -
Bva06g03011 483 PANTHER BNAANNG18710D PROTEIN 12 429 - -
Bva06g03011 483 CDD AAA 222 343 - -
Bva06g03011 483 PANTHER BCS1 AAA-TYPE ATPASE 12 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03011 Bva-Chr6 18723232 18725115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g03011 217 341 Calmodulin-binding Proteins AT3G56690 27.338 5.37e-06 47.4