Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02999 ATGGACACAACTCAGTGGGCACAGGGTATTGGAGTGGTTAAACCTATGGAAGCTGGTTCAAAGCCTCCCATGTTGGAGAGAAGAGCAAGGCCACAGAAAGATCAAGCTCTGAACTGCCCAAGAAGGTATTGGACTGAAGGTGGTTCTTTGAGAAATGTTCCTGTGGGTGGAGGTTCAAGAAAGAACAAGAGATCaacatcttcatcatcatcaacacCTTCATCACAAGCAGCTCCATCATCAGCAAAGAAGCTTCCTGATCTGACGGCTCCAAATTTCCCTCAATCTGCTTCTCAAAACCCAAAGATCCATCAAGGGCAAGATCTTAACTTGGCTTACCCACCAGCTGAGGACTACAGCACCATATCTAAGTTCATTGAGGTTCCTTATAGCACTGAAGACAAGggtcatcatcatcatcgtcaCCTTCAAAATCCCAGTTCCTCATCATCAGCATCTTCTCAGTTGTCAGCTATGGAGCTTCTGAAAACTGGGATTGCTTCATCGAGGGGTTTGAATTCTTTCATGCCCATGTCAGTATCAGATTCCAGCACAATGTATAATTCAAGTGGGTTTCCTCTGCATGACTTCAAGCCAACTCTTAACTTTAGTCTCGAGGGATTTGAAAATGGTTATGGGGCTCTTCAGGGAATTCAAGAGAGCACCACTGGTGCAAGGATCTTGTTTCCTGTAGAGGATTTGAAGCAGGTTCCGAGTACTACTACTGAGTTTGAACAGAACAGAAGCCAAGCAGATTCTACTGGGTATTGGAATGGCATGTTAGGTGGAGGATCATGGTA 800 0.4275 MDTTQWAQGIGVVKPMEAGSKPPMLERRARPQKDQALNCPRYWTEGGSLRNVPVGGGSRKNKRSTSSSSSTPSSQAAPSSAKKLPDLTAPNFPQSASQNPKIHQGQDLNLAYPPAEDYSTISKFIEVPYSTEDKGHHHHRHLQNPSSSSSASSQLSAMELLKTGIASSRGLNSFMPMSVSDSSTMYNSSGFPLHDFKPTLNFSLEGFENGYGALQGIQESTTGARILFPVEDLKQVPSTTTEFEQNRSQADSTGYWNGMLGGGSW 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02999 265 PANTHER DOF ZINC FINGER PROTEIN DOF4.6-LIKE 39 262 - -
Bva06g02999 265 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 41 IPR045174 GO:0003700|GO:0006355
Bva06g02999 265 PANTHER DOF ZINC FINGER PROTEIN DOF4.6-LIKE 1 41 - -
Bva06g02999 265 Pfam Dof domain, zinc finger 38 63 IPR003851 GO:0003677|GO:0006355
Bva06g02999 265 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 39 262 IPR045174 GO:0003700|GO:0006355
Bva06g02999 265 MobiDBLite consensus disorder prediction 133 155 - -
Bva06g02999 265 MobiDBLite consensus disorder prediction 58 81 - -
Bva06g02999 265 MobiDBLite consensus disorder prediction 1 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02999 Bva-Chr6 18670090 18672292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02999 39 265 C2C2-Dof Transcription Factor Family AT3G61850 40.244 1.05e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva06g02999 zf-Dof 1.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02999 - - qsu:112023740 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01922 12 15335757 15337921 Bva06g02999 06 18670090 18672292 ECH
Bva02g02069 02 21493772 21496180 Bva06g02999 06 18670090 18672292 ECH
Bva08g01948 08 13078505 13080418 Bva06g02999 06 18670090 18672292 ECH
Bva06g02999 06 18670090 18672292 Bva06g02999 06 18670090 18672292 ECH