Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02985 ATGAACTACTTCCCCGAATTTGACTTAACCACAACTGAGAATTCACAAGGATTCAACTTATTTGAGCAACAAGAAAGGATAATGGAGTTTTCACCATTGGAGGGCTTTTTCAACATGCATTCGGTCCCATTCCCGTACCAAAGTGAGCAACTTTGTTTCAACGATTTTCCTAATCTTGAAGATCTCAGCAGCAACTTCGCTTGTTTAGAATACAATCTGTCACCTATTTATGAAGGTTTGGTGATCGATCAAAAGCCCCTGAGCGTTAATTCACCTGCGCCCCCACATGCACATTGTGAAAATGTTGCTGACAATTTGGACGAGCTTTCAATGGTAGTGGCAAGTGGGTCTTCACATTCTTGCAAGAATGAGGAGAGGGTTGAGGGAACGAGGCCAAATGACAGGAGGAGAAGAACTTGTTCATTGGAATTGGATGAGATAAGGAATCACTTTGATGTTCCTATCACCAAAGCAGCCAAGCAGATGAACGTGGGATTGAGCCTGTTGAAAAAGAGGTGCAGAGAGCTCAACATTATGAGGTGGCCACATAGGAAAATCAAGAGCTTGAACTCACTCATCTACAATGTAAAGGAACTGGGGTTGACCGAAGAGGTGGCTATGTTGGAGAAGCACAAACTGCTGGTGGAGAAACTACCTGATATGGAACTCAGCGAAGAAACTAAGAGGCTTAGGCAAGCCtgtttcaaagaaaattacaagagGAGAAGGCATCTGGTTATTCAAGCTggacttta 755 0.4199 MNYFPEFDLTTTENSQGFNLFEQQERIMEFSPLEGFFNMHSVPFPYQSEQLCFNDFPNLEDLSSNFACLEYNLSPIYEGLVIDQKPLSVNSPAPPHAHCENVADNLDELSMVVASGSSHSCKNEERVEGTRPNDRRRRTCSLELDEIRNHFDVPITKAAKQMNVGLSLLKKRCRELNIMRWPHRKIKSLNSLIYNVKELGLTEEVAMLEKHKLLVEKLPDMELSEETKRLRQACFKENYKRRRHLVIQAGL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02985 251 Pfam RWP-RK domain 142 189 IPR003035 -
Bva06g02985 251 ProSiteProfiles RWP-RK domain profile. 129 210 IPR003035 -
Bva06g02985 251 PANTHER PROTEIN RKD4 117 243 IPR044607 GO:0003700
Bva06g02985 251 PANTHER PROTEIN RKD4 117 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02985 Bva-Chr6 18597772 18598906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02985 142 245 AtRKD Transcription Factor Family AT5G53040 66.346 4.20e-44 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Bva06g02985 RWP-RK 2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02985 - - aprc:113850801 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02985 06 18597772 18598906 Bva06g02985 06 18597772 18598906 ECH