Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02979 ATGGGGAAGAAAGGAGGCGGTTGGTTCTCGTCGGTGAAGAGAGTTTTCAAGTCATCTTCTAAGGAGTCACCGATGCCGGAGAAGAAGAATGGGCGTGGAGTTCAGAAGGAAAGTGCAGAGAAATGGCGGCAAGAGGCGCCAGAAGTGGTGTCTTTTGAGCATTTTCCGGCAGCTAGTTCTCCAGATAATGTTACTATTGAAGAAAGTACGACATCAACGCCTGTGACTGAAGATAGAAATCATGCCATAGCTGTCGCGgcagcaacagcagcagcgGCTGAAGCTGCAGTTGCTGCGGCTCAAGCAGCTGCTAGAGTGGTTCGATTGGCAGGTTATGGACGCCAGTCCAAGGAAGAAACAGCAGCAACGCTGATTCAATCATACTACAGAGGCTACCTAGCTCGACGGGCGCTACGTGCTTTGAAGGGATTAGTGCGGTTGCAAGCACTTGTGAGGGGCCACAATGTGCGCAAGCAGGCGCAAATGACAATGCGCTGCATGCAAGCATTGGTTCGAGTGCAGGCAAGGGTGCGAGCTCGCAGACTCCAATTGACCCATGAGAAGCTTCGGAAGACAGCGGAGGACCACGAGCATAGAGATTTTGATGAACAACAATATCCAAGGCCAATGAGCCCCATGAAAAGACGTGACATGGATGCAGGTTGGGACAGTGGGCGTCAAAGCAGTCAGACAATTCAGGAAAACAACTTGAGGAAACAGGAAGCTGcaatgaagagagagagagctctTGCCTATGCTTTCAACTATCAGCAGCAGAAACAATTTCTACCCAGAGATGCCAATGGTGATGATATCAGTGACTATGTTGATGATCGTGAAAAGGCTCAATGGGGTTGGAACTGGTTGGAGCGTTGGATGTCATCGCAACCATACCATGATAGGCAAATGGGGCCACGTGAAACCTCTTATATGACTCTTGCTACCACAACTACCACTGCTACAGATGACATGTCTGAGAAGACCGTGGAAATGGACATCGCTGCACCTTCCCCCTCAGACAAAACGAACAATGACTTGCCTGGGTCCAGCCCAATCTCTGGTAAGCACCAGAGACGACCCAGTTATATGGCCCCAACCCAGTCTGCCAAGGCCAAGGTGCGGAGTCAAGGCCCAACTAAGCCACGTGGCCCGGCTGGGCCTCAATGGAATTCATCAGCGAGGAAAGCCTCTATTACTGGATCGGGTTGTGACTCATCTAGCTCGGGTGGAGGAACTGTAGCCTATCAGTTTCCAAGAAGCCCAAGCCCAAAACTAAATGGGTATCGGCCAATGTCTAGACGGATTGCAGGCAGCAGCCCAGATTATGTTGGAGTTGAGGATTGGGCCATGCCTCTTGGCGCCCACGGTTGGGcatg 1376 0.4964 MGKKGGGWFSSVKRVFKSSSKESPMPEKKNGRGVQKESAEKWRQEAPEVVSFEHFPAASSPDNVTIEESTTSTPVTEDRNHAIAVAAATAAAAEAAVAAAQAAARVVRLAGYGRQSKEETAATLIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRLQLTHEKLRKTAEDHEHRDFDEQQYPRPMSPMKRRDMDAGWDSGRQSSQTIQENNLRKQEAAMKRERALAYAFNYQQQKQFLPRDANGDDISDYVDDREKAQWGWNWLERWMSSQPYHDRQMGPRETSYMTLATTTTTATDDMSEKTVEMDIAAPSPSDKTNNDLPGSSPISGKHQRRPSYMAPTQSAKAKVRSQGPTKPRGPAGPQWNSSARKASITGSGCDSSSSGGGTVAYQFPRSPSPKLNGYRPMSRRIAGSSPDYVGVEDWAMPLGAHGWA 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02979 458 PANTHER IQ-DOMAIN 5-RELATED 1 431 - -
Bva06g02979 458 ProSiteProfiles IQ motif profile. 118 146 IPR000048 GO:0005515
Bva06g02979 458 MobiDBLite consensus disorder prediction 334 441 - -
Bva06g02979 458 Pfam IQ calmodulin-binding motif 145 160 IPR000048 GO:0005515
Bva06g02979 458 Pfam IQ calmodulin-binding motif 121 139 IPR000048 GO:0005515
Bva06g02979 458 Coils Coil 179 199 - -
Bva06g02979 458 SMART iq_5 117 139 IPR000048 GO:0005515
Bva06g02979 458 SMART iq_5 140 161 IPR000048 GO:0005515
Bva06g02979 458 MobiDBLite consensus disorder prediction 1 45 - -
Bva06g02979 458 Pfam Protein of unknown function (DUF4005) 341 410 IPR025064 -
Bva06g02979 458 MobiDBLite consensus disorder prediction 193 235 - -
Bva06g02979 458 MobiDBLite consensus disorder prediction 337 374 - -
Bva06g02979 458 MobiDBLite consensus disorder prediction 193 222 - -
Bva06g02979 458 Gene3D - 116 169 - -
Bva06g02979 458 ProSiteProfiles IQ motif profile. 142 169 IPR000048 GO:0005515
Bva06g02979 458 MobiDBLite consensus disorder prediction 390 415 - -
Bva06g02979 458 MobiDBLite consensus disorder prediction 20 45 - -
Bva06g02979 458 PANTHER IQ-DOMAIN 21 1 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02979 Bva-Chr6 18569813 18573197 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02979 1 424 IQD Protein Family AT3G49260 54.367 5.19e-105 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02979 - - aprc:113873497 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02979 06 18569813 18573197 Bva06g02979 06 18569813 18573197 ECH