Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02968 ATGTATGCAGAGACGGGTCTTCTGTTTCCTTATCTTCATAATTTCTCTCAAGAGCTTCAGCAACTAGAAGAGTACTGCAAAACCCAGAAGCCCAATGTTTCAATGGGTGACCTCATCCAGTCTTCTGCCTTATCAGAGTATGATTTGGGAGCAGAGGGTGATCTGTTTAAGGCTCCTGAACCAACCATTGAAGAACCAATCATGGACATTGATCCCATGATCGCAGCCATTTCGATGATATCTTGCGGGGAAGAAGTTATCTCCTCTCAGGGACTAAAATCCACAGATATTGACTCTCTTCAAAATGAGCAGCTACTGAGTGAGGTATTCTATGAGTGCAAAAAGGATCTTATTGAAAAGGCAGCGATAGATACTCCTCTCTCTGAGATTCTTGGTATCAAGGTCCCTGCCCCGAAGATAGAGGGTAACCAAActcaagaaaacaaatcacTTTTTGACATGCCATTACCAAAAAGTGTTAGTTCAGAATGTCTGAGCTCAATGGACTGGATTCATGGAGCTGCAGTGAAGCCTGcttttcttgattttccaGGAATTGATTTCAATGCAGTTTATGGCATGAGGAGGGCATTCAGTGAAGGAGATATTAAGACTCTTCGTAATAGCAATGTGGGCCTCATCCAATCTCCCGTTGAAAGGCCTTTTGTTATCAGCAACTGCACCATAGAGGAACGACGTGAAAAGCTGTCCAGATATAGGAATAAGAAGACGAAGAGGAATTTTGGCAGAAAAATCAAGTACGCTTGCAGGAAGGCTCTTGCTGACAGTCAACCAAGAATCCGCGGAAGATTTGCCAGGACTGAAGAATCTGACTTTAAGAGGCAATA 848 0.4175 MYAETGLLFPYLHNFSQELQQLEEYCKTQKPNVSMGDLIQSSALSEYDLGAEGDLFKAPEPTIEEPIMDIDPMIAAISMISCGEEVISSQGLKSTDIDSLQNEQLLSEVFYECKKDLIEKAAIDTPLSEILGIKVPAPKIEGNQTQENKSLFDMPLPKSVSSECLSSMDWIHGAAVKPAFLDFPGIDFNAVYGMRRAFSEGDIKTLRNSNVGLIQSPVERPFVISNCTIEERREKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFARTEESDFKRQ 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02968 282 Pfam CCT motif 232 274 IPR010402 GO:0005515
Bva06g02968 282 ProSiteProfiles CCT domain profile. 232 274 IPR010402 GO:0005515
Bva06g02968 282 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 26 280 - -
Bva06g02968 282 PANTHER CCT MOTIF FAMILY PROTEIN 26 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02968 Bva-Chr6 18503963 18508966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02968 213 277 C2C2-CO-like Transcription Factor Family AT3G21880 41.538 1.97e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva06g02968 CCT 2.6e-16 CL0281