Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02960 ATGATGGATTGCAACAAAGATGAGGCAGTTAGGGCAAAAGAAATAGCAGAGAGGAAATTTTCGGAGAGGGAATATGCTGGTTCAAAGAAGTTTGCTCTCAAGGCTGTAAATCTGTATCCTGAACTGGAGGGTCTGTCCCAGTTTTTGACAACTCTTGATGTTTATATTGCTGCTGAGAATAAAGTGAGTGGAGAAATGGATTGGTATGGTATACTTGGTGTGAACCCCTTTGCTGATGACGATACAGTTAGAAAACAGTACAGGAAGCTGGCTCTGACTCTTCACCCTGACAAAAACAAGTCTTTGGGTGCAGAGGGTGCATTTAAGTTGGTTTCAGAGGCATGGAGTTTGTTATCAGATAAAGCCAAGAGACTAGCATATAACCAGAAGAGGAGTTTGAAAGGATACCAACATAAGACTCCCAGTCATGGGGGTTCTCAATCAGAAGCGCCTAGTTCAAATGGTTTTCATAATTTCACCAAGAATGTAACTTCAAATGTGAGGACTGGAAACAATAATGCTCGGGCAGGTGCCACCTTGGCTCCTCCTCATAAAAAGGCTGATACCTTTTGGACTATTTGTAATCGGTGCAAGACACATTATGAATATCTCAGAATTTATTTGAACCATAATCTTCTATGTCCCAACTGTAATGAGGCTTTCCTGGCTGTAGAGAGGCCTCCACCTCCCAATGCTTTTAAGTCATCAAATTGGTCTTCTCGTCAACACCAACAGAGTTCTCAACATTATGGCGCAAGTAATAACACAAGCTTTCAGTGGGATTCTCACTCCAGAGTGACTGGTCAAACTGCGAGTGAGAAAGTGAGGAGAGAACGTGAGGGAGCACCATCAATTGCCGAATGGCAGAGGAGTCAAATGTCTGAGAGGACCGATGGTTCATTTCATAAAGTGGATAAGTCTTTTAAGAAGATGAGGACAGATGACATTCGCATGAATGGTTATCAAGGATACATGGCCACTGGACAGGGAGCAGCTGGTTTGGGATGTGTTTCTGACTCAAGGATGCCTAACCTGGAAACCGAAAGGAGCTATGGTTTTTCAGGTACTACTTCAAAGCCTTACAGTAGAAGAGAGTTGTCTATGTTTGAAATACGAAACATATTGATGCATAAGGCACGGATTGAAGTTCGTAAGAAACTTGAAGAATGGAGATCAGTAGCTGAAGCTAAGATTACAAAcaaggagaaagagaataagAGACAAAAGAGCACATCTTATGACAAAGCACCTAATCCAAACACGCATGGAAAGTCCAATCTTAATGGTAAAGGTTATCAGGATGGTGATTCTTTTGCTGTCACATCTGATAATACAAATAAGGGAAATGAAGCCTTCATTTCAATCAATGTTCCTGACCCTGATTTTCACAATTTTGATTTGGATAGAGATGAAAATTCCTTTGGTGAGGACCAGGTCTGGGCTGcttatgatgatgatgatggaatGCCTCGATATTATGCTCGAATCCACAAGGTGATATCTATGAATCCATTTAGAATGCGGATCAGTTGGCTTAATTCTCGAAGCAACAGTGAGTTGGGACCGATAGATTGGATAGGTTCTGGTTTTTATAAAACTTGTGGGGATTTCAGGACTGGCAAGCATGAAATAACTGAatcattaaattctttttcacaTAAGGTTAGTTGGACAAAAGGCAATAGAGGAGTTATTCGCATTTTTCCTGGGAAGGGTGAGGTCTGGGCTCTCTATAGAAACTGGTCTCCAGACTGGAACGAAAAGACTTCCGATGAAGTGATTCACAGGTATGACATGGTAGAGGTgcttgaagattttgatgagGAGCAAGGTATATTAGTTGCCCCACTTATTAAGGTTGCTGCCTTCAGGACGGTGTTTCGTAGGCATGCTGACACTGATCAGGTGAGAAGGATTCCAAAAGACGAAATGTTTCGCTTTTCTCATCAGGTTCCAAATTACTTGCTTACAGGCCAAGAAGCTCATAATGCCCCTAAAGGTTGTAGAGAGTTGGATCCTGCAGCTACTCCTTTAGACCTCCTTCAGGTAATGACAGAAGCTAATGAAGCATCGGGTAATGTCGACAAAACAAAGGAAGGCACATCACCCAGTTCCCCAAAAAGACTTGAGGTTGAAATGGGGAAGAATGCTTCAGAAACTAGCACAGGAGAGATGGTAGTGGAGGATGGGAAACAGACAATGGATGATAGATG 2213 0.4094 MMDCNKDEAVRAKEIAERKFSEREYAGSKKFALKAVNLYPELEGLSQFLTTLDVYIAAENKVSGEMDWYGILGVNPFADDDTVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKAKRLAYNQKRSLKGYQHKTPSHGGSQSEAPSSNGFHNFTKNVTSNVRTGNNNARAGATLAPPHKKADTFWTICNRCKTHYEYLRIYLNHNLLCPNCNEAFLAVERPPPPNAFKSSNWSSRQHQQSSQHYGASNNTSFQWDSHSRVTGQTASEKVRREREGAPSIAEWQRSQMSERTDGSFHKVDKSFKKMRTDDIRMNGYQGYMATGQGAAGLGCVSDSRMPNLETERSYGFSGTTSKPYSRRELSMFEIRNILMHKARIEVRKKLEEWRSVAEAKITNKEKENKRQKSTSYDKAPNPNTHGKSNLNGKGYQDGDSFAVTSDNTNKGNEAFISINVPDPDFHNFDLDRDENSFGEDQVWAAYDDDDGMPRYYARIHKVISMNPFRMRISWLNSRSNSELGPIDWIGSGFYKTCGDFRTGKHEITESLNSFSHKVSWTKGNRGVIRIFPGKGEVWALYRNWSPDWNEKTSDEVIHRYDMVEVLEDFDEEQGILVAPLIKVAAFRTVFRRHADTDQVRRIPKDEMFRFSHQVPNYLLTGQEAHNAPKGCRELDPAATPLDLLQVMTEANEASGNVDKTKEGTSPSSPKRLEVEMGKNASETSTGEMVVEDGKQTMDDR 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02960 737 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Bva06g02960 737 MobiDBLite consensus disorder prediction 270 284 - -
Bva06g02960 737 MobiDBLite consensus disorder prediction 133 162 - -
Bva06g02960 737 MobiDBLite consensus disorder prediction 232 301 - -
Bva06g02960 737 MobiDBLite consensus disorder prediction 232 269 - -
Bva06g02960 737 PANTHER HEAT SHOCK PROTEIN-LIKE 2 696 - -
Bva06g02960 737 CDD DnaJ 67 120 IPR001623 -
Bva06g02960 737 MobiDBLite consensus disorder prediction 412 443 - -
Bva06g02960 737 Pfam DnaJ domain 67 128 IPR001623 -
Bva06g02960 737 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Bva06g02960 737 PANTHER BNAC03G44070D PROTEIN 2 696 - -
Bva06g02960 737 SMART dnaj_3 66 123 IPR001623 -
Bva06g02960 737 MobiDBLite consensus disorder prediction 400 443 - -
Bva06g02960 737 Pfam Domain of unknown function (DUF3444) 454 660 IPR024593 -
Bva06g02960 737 PRINTS DnaJ domain signature 103 123 IPR001623 -
Bva06g02960 737 PRINTS DnaJ domain signature 87 102 IPR001623 -
Bva06g02960 737 PRINTS DnaJ domain signature 69 87 IPR001623 -
Bva06g02960 737 SUPERFAMILY Chaperone J-domain 60 127 IPR036869 -
Bva06g02960 737 MobiDBLite consensus disorder prediction 688 737 - -
Bva06g02960 737 Gene3D DnaJ domain 64 176 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02960 Bva-Chr6 18435716 18439877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02960 5 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.621 1.11e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02960 - - gmx:100814722 1055.05