Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02959 atgaattATATGTTTCTTCTCTTGGTCACTTTCaagATCATCAAGAAGAAGCTGACCAAGATACAAGAAGCAATGGGATTACAAACATCACATACTGCTAGTAAACAGAAAGTGCAACCCATCTTGAAATCCATGGAGGAAGCAAGTGATCATAAAGCCAACCCGTCAAGCTATGAATCATGGATGGTGAGACACCCATCTGCGCTGCGACATTTTGACAGATTAATGAAAGGAGCCACTGGGAAAAGAATCGTAGTTTTCTTGGACTATGATGGTACCTTGTCACCCATTGTGAATAACCCTGATCGTGCATTTATGTCTGATGAGATGCGTGCAGTGGTGTGTGAAGTTGCCAAATGTTTTCCAACGGCGATTATTAGTGGAAGAAGCAGAGATAAGgTTAAAGCATTTGTCAAGTTAAGTAACGTATATTACGCTGGCAGCCATGGGATGGATATAATGGCACCAGCCAAGCCAGTTGTTACATCTTCTAATGGCAAGCACGATAACACAGCCCTTAACACAACGGACGATGGAGTTCCCTTTCAACCTGCCAAGAAGTTTCTACCTGCAATTAGAGAGATACTAACAGTTCTAGAGACCAAAATAAGAGACATACAAGGTGCAAGGGTTGAGGACAACGGTTTCAGCATCTCTGTACATTTCCGGCAGGTCCAAGAAGAGAATTATGGCATATTGGAAGAGATGGTGAAATCTGTCCTTGAAAACTTTCCAGATTTCTGCTTAAATGAGGGTAAAAAGGTTTTGGAAATAAGGCCATCCATAAAGTGGAACAAAGGTCATGCCCTAGAATATTTTCTTGACACGCTAGGGTTAAGCAGTTCCAGCAATATCCTTCCGGTGTATATTGGCGATGATCGAACCGATGAAGATGCTTTCAAGGTCATACATAGCAGGGGACAAGGTTACCCTATTATAGTGTCTTCAACTCCGAGGGATACACAAGCTTTGTATTCTTTGCGTGATCCGTCAGAAGTACTAATTTTCTTGTCAAGGCTggcaaaatggagaaaaatctCGTGCTCAAGCAGGTCTTTAAATTTTGGtta 1070 0.4084 MNYMFLLLVTFKIIKKKLTKIQEAMGLQTSHTASKQKVQPILKSMEEASDHKANPSSYESWMVRHPSALRHFDRLMKGATGKRIVVFLDYDGTLSPIVNNPDRAFMSDEMRAVVCEVAKCFPTAIISGRSRDKVKAFVKLSNVYYAGSHGMDIMAPAKPVVTSSNGKHDNTALNTTDDGVPFQPAKKFLPAIREILTVLETKIRDIQGARVEDNGFSISVHFRQVQEENYGILEEMVKSVLENFPDFCLNEGKKVLEIRPSIKWNKGHALEYFLDTLGLSSSSNILPVYIGDDRTDEDAFKVIHSRGQGYPIIVSSTPRDTQALYSLRDPSEVLIFLSRLAKWRKISCSSRSLNFG 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02959 356 Gene3D - 166 261 - -
Bva06g02959 356 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 86 305 IPR006379 -
Bva06g02959 356 TIGRFAM T6PP: trehalose-phosphatase 81 342 IPR003337 GO:0003824|GO:0005992
Bva06g02959 356 Pfam Trehalose-phosphatase 87 331 IPR003337 GO:0003824|GO:0005992
Bva06g02959 356 CDD HAD_TPP 85 333 - -
Bva06g02959 356 Gene3D - 86 327 IPR023214 -
Bva06g02959 356 SUPERFAMILY HAD-like 85 344 IPR036412 -
Bva06g02959 356 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 33 352 IPR044651 GO:0004805|GO:0005992
Bva06g02959 356 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 33 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02959 Bva-Chr6 18425706 18432594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02959 81 342 Trehalose Biosynthesis Gene Families AT1G06410 23.929 3.58e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02959 K01087 - gmx:100809194 490.73