Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02951 ATGGGAGATTGGGATCATAAGAATCTTATAAATGAGCTGGTACAAGGAAAGGATCTGGCAAGACAGCTCCAAATCAGTCTCAATGCCCCTTCTTCGTCCCAAGAAACCCGTGAGTTTTTAATCCAGAAGATCGTGGACTCATTCGAAAAGGCGCTTTCAGCCATCAACTGGAACACAGGGTCACCGCCTTTGAGCGGTAGCCCCCGCAGTGAAGACTCCGAGAAAGATTTGAAGGACCAAGAACATAACGCCTCCAGAAAAagAAAGGCTATGCCGAGGTGGACAAAACAGATTCGATTTAAACCAGGGTTGGGAGTGGAAGGGCCTCTTGACGATGGCTACAGTTGGAGAAAATATGGCCAGAAAGACATCCTTGGAGCCAAATATCCGAGGGGTTATTACAGATGCACTCACAGAAATGTTCAAGGTTGCTTGGCTACAAAGCAAGTGCAAAAATCTGATGAAGACCCATATGTGTTAGAAATCACTTACCGGGGAAAGCACACTTGCACACAGGCATCCAATGTTAACGGAGCTTCTCCTTCAGGAACTCgagaaaacaacaaagaacCTAACCCAAATTTGGGTGCTCAGCAGCAGAATGTGCAGCAATCGCAGGAACTGCTTATGAGCCTGAGGGCAGGGTTAAGAATCCTAACACAGAACTTAGATACTCCTGCTCAGCCATCGTTTCCTCCATTCTACGTCCCTTCAAATACAAAGCCTGAAAACCAAGCATTTTTGACCCCTATGATTGAAAACAATTTTGCTCAAAGCTTCAACTATCCTTCCTATATGTCCCCGGCCACTTCCGGAACAACCTACTTTTCAATTTCTGATCCTGATGGGGTGAATACCTGTGGGGCCAACCCAACTTCTGGCTCTCAGATCAATGACATCATCTCAGCTGCAAACTCTCCCACCGTTGGATCAAGCTTTCCATTGGATCAATTCCAACTTGACCAGAACTTCACATTTGATAACACACGGTTCTTTTCCTA 1001 0.4505 MGDWDHKNLINELVQGKDLARQLQISLNAPSSSQETREFLIQKIVDSFEKALSAINWNTGSPPLSGSPRSEDSEKDLKDQEHNASRKRKAMPRWTKQIRFKPGLGVEGPLDDGYSWRKYGQKDILGAKYPRGYYRCTHRNVQGCLATKQVQKSDEDPYVLEITYRGKHTCTQASNVNGASPSGTRENNKEPNPNLGAQQQNVQQSQELLMSLRAGLRILTQNLDTPAQPSFPPFYVPSNTKPENQAFLTPMIENNFAQSFNYPSYMSPATSGTTYFSISDPDGVNTCGANPTSGSQINDIISAANSPTVGSSFPLDQFQLDQNFTFDNTRFFS 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02951 333 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED 1 330 - -
Bva06g02951 333 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 330 IPR044810 GO:0003700
Bva06g02951 333 MobiDBLite consensus disorder prediction 172 204 - -
Bva06g02951 333 SMART WRKY_cls 110 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva06g02951 333 SUPERFAMILY WRKY DNA-binding domain 109 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva06g02951 333 MobiDBLite consensus disorder prediction 69 88 - -
Bva06g02951 333 MobiDBLite consensus disorder prediction 58 96 - -
Bva06g02951 333 Pfam WRKY DNA -binding domain 111 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva06g02951 333 ProSiteProfiles WRKY domain profile. 105 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva06g02951 333 Gene3D WRKY domain 105 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02951 Bva-Chr6 18376713 18378626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02951 2 192 WRKY Transcription Factor Family AT5G24110 51.777 4.07e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva06g02951 WRKY 5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02951 - - gmx:100776906 380.563