Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02941 ATGCCTAAATCCCTTCAGAGATTTCCAAGTGAAGCCTTTTCTGGCAACAATGTTACCTCTGCAAGTGCACTTCCCCCAGCTTTTCCAGTTCGCCCACCAAAGAGAACATCAAAACTTAGTGAACCCGCATTACTGGGTATCATCATTGGGGCATGTGTAGTGGGATTTGTGGTTATTGCAGCTTTCATTATTCTGTGCTGCTATGACAAAGGAGGGGAAGATGGGGGGCTACCAGTAAAGtcacagaaaaaagaagtcGCACTGAAGAAAACAGTTTCTGAAAGTGGTCAAGATAAAAACAAGATTGTGTTCTTTGAGGGTTGCAGTCTTGCATTTGACCTAGAGGATTTGTTGAGAGCATCTGCTGAGGTACTTGGAAAGGGAACCTTTGGCACAACATATAAGGCAGCTCTAGAGGATGCAACCACAGTTGTGGTGAAAAGGTTGAAGGAAGTCACTGTTGGAAAACGCGAGTTTGAACAGCTGATGGAGGTGGTGGGGAGAATAAGGCATGAAAATGTGGCTGCACTAAGGGCTTATTACTATTCCAAAGAGGAGAAACTTATGgtatatgattattttgaacAGGGTAGCGTTTCTGCAATTTTACATGGTAAAAGAGCAGAAGGTAGGACCCATTTGGACTGGGATACCCGGCTAAGAATTGCAATTGGTGCAGCAAGAGGCATTGCCCATATTCACACTCAACATGGAGGAAAACTTGTCCATGGAAACGTAAAAGCTTCAAACATTTTCCTCAACCCCAATGGATTTGGTTGTGTATCTGATATCGGTTTGGCAACGTTGATGAGTCCAATACCCTCACCAGCACTGAGAAGTTCAGGATACCGAGCGCCTGAATTAACAGACTGCAGGAAAGCAGCACATGCATCTGATGTTTACAGCTTTGGGGTGCTGCTGCTCGAGCTTCTAACTGGAAAATCCCCCATACATACTGTGGGAGGTGAGGAGGTTGTCCACTTGGTTAGATGGGTGAACTCTGTGGTCAGAGAAGAGTGGACCGCAGAAGTCTTTGACGTGGAGTTACTGAGGTATCCAAATATAGAGGAAGAAATGGTTGAGATGTTACAATTAGGATTGGCATGTGTGGTCAGGATTCCAGAGCAAAGGCCAAAAATGCCTCATGTAGTGACAATGCTAGAGGAGATACGTCGGGTAAATACTGGAAATCGATCATCCACTGAATCAAGATCAGGAGTTTCTACCCCAACTATTATTGCAGCTGAGATGGCCTCTTCTTCTGTTCCACAGTg 1274 0.4388 MPKSLQRFPSEAFSGNNVTSASALPPAFPVRPPKRTSKLSEPALLGIIIGACVVGFVVIAAFIILCCYDKGGEDGGLPVKSQKKEVALKKTVSESGQDKNKIVFFEGCSLAFDLEDLLRASAEVLGKGTFGTTYKAALEDATTVVVKRLKEVTVGKREFEQLMEVVGRIRHENVAALRAYYYSKEEKLMVYDYFEQGSVSAILHGKRAEGRTHLDWDTRLRIAIGAARGIAHIHTQHGGKLVHGNVKASNIFLNPNGFGCVSDIGLATLMSPIPSPALRSSGYRAPELTDCRKAAHASDVYSFGVLLLELLTGKSPIHTVGGEEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEMVEMLQLGLACVVRIPEQRPKMPHVVTMLEEIRRVNTGNRSSTESRSGVSTPTIIAAEMASSSVPQ 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02941 424 Pfam Protein tyrosine and serine/threonine kinase 123 386 IPR001245 GO:0004672|GO:0006468
Bva06g02941 424 PANTHER LRR RECEPTOR-LIKE KINASE 1 416 - -
Bva06g02941 424 ProSiteProfiles Protein kinase domain profile. 119 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02941 424 Gene3D Phosphorylase Kinase; domain 1 82 193 - -
Bva06g02941 424 ProSitePatterns Protein kinases ATP-binding region signature. 125 156 IPR017441 GO:0005524
Bva06g02941 424 MobiDBLite consensus disorder prediction 394 424 - -
Bva06g02941 424 PANTHER OS05G0588300 PROTEIN 1 416 - -
Bva06g02941 424 Gene3D Transferase(Phosphotransferase) domain 1 194 417 - -
Bva06g02941 424 SUPERFAMILY Protein kinase-like (PK-like) 123 388 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02941 Bva-Chr6 18325511 18329080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02941 1 401 Receptor kinase-like Gene Family AT4G23740 57.212 1.27e-159 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva06g02941 PK_Tyr_Ser-Thr 1.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02941 - - gmx:100809359 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02941 06 18325511 18329080 Bva06g02941 06 18325511 18329080 ECH