Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02937 ATGTTGCCACCACATCATAGCAGCGGTCTCGACCAGATGCTGCAGTTCCCTGCAGCTCCAACGCCATTGCCGATGGATCGAAGGTGGAAGCCCAACATTGAGCTTGCTCCCAATTGCCCGCGTTGCGCTTCTTCCAACACTAAATTCTGTTATTACAACAATTATAGCTTATCACAGCCCAGATACTTCTGTAAAGGCTGTAGAAGGTACTGGACCAAAGGTGGCTCTCTACGCAATGTCCCCGTCGGCGGTGGTTGCCGCAAAATCCGCCGCGGGAAGGCGGTGAGGCGCCTACAAAGTCATAGTCGGAGCTACGCTGTGAACTTGGGTTCTGAGGATACAGAGTCATTAGCCGATAAACCCGACCGTGGGTGTTGTGATATTGACATGGCCGTCGTGTTCGCAAAGTTTTTGAATCAAAACCTCAACTCTGCTCATCAGGAGTTGGACAATGGTTCTTCCTCCACCAACTTATACAATTCTCTTACGCCGGAGAGCGTTGAAAGTGAGAACGATGTCGTATTTGTGGAGTCACAGAAGCATTTTGATCATCATCATCCCATGGCGGCCATCACAGAAGAATTATTTCCGCAACAAGATCAGAGTAGGATTCAGAATTATGTACGGGATGATCATTTGAGTGGGACCGAGATGCAGGGATTACTGGGTGTGGGTGGGGATGAGGTGGCCCAAGATATGTTCTGGTCCAATGATGCTACGACGTCGTCTTTGGTTAACTGGCAATCTCCGGCAATGCAAGTGCAGGAGTTGGACTATTCCAGCCTGCCCTTCCACAATGACGCCCTTCAATTACCACCTGCTTCTTCGATGAACCAAATTACTGATGGTTGGAGCTGGAGTTCCTTTGACTTTTCAACTTCGGAAGTCTTTTcaatacttta 902 0.4856 MLPPHHSSGLDQMLQFPAAPTPLPMDRRWKPNIELAPNCPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKIRRGKAVRRLQSHSRSYAVNLGSEDTESLADKPDRGCCDIDMAVVFAKFLNQNLNSAHQELDNGSSSTNLYNSLTPESVESENDVVFVESQKHFDHHHPMAAITEELFPQQDQSRIQNYVRDDHLSGTEMQGLLGVGGDEVAQDMFWSNDATTSSLVNWQSPAMQVQELDYSSLPFHNDALQLPPASSMNQITDGWSWSSFDFSTSEVFSIL 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02937 300 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 290 IPR045174 GO:0003700|GO:0006355
Bva06g02937 300 ProSitePatterns Zinc finger Dof-type signature. 39 75 IPR003851 GO:0003677|GO:0006355
Bva06g02937 300 PANTHER DOF ZINC FINGER PROTEIN DOF1.2 16 290 - -
Bva06g02937 300 Pfam Dof domain, zinc finger 38 90 IPR003851 GO:0003677|GO:0006355
Bva06g02937 300 ProSiteProfiles Zinc finger Dof-type profile. 37 91 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02937 Bva-Chr6 18303025 18304164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02937 12 222 C2C2-Dof Transcription Factor Family AT1G21340 40.271 1.66e-40 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva06g02937 zf-Dof 1.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02937 - - mtr:MTR_3g090430 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02937 06 18303025 18304164 Bva06g02937 06 18303025 18304164 ECH